PlantSME Plant secondary metabolism enzyme database

Tetracentron sinense (tetracentron_sinense)

Imported from atlas release summary for Tetracentron sinense.

2177
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.69% Alkaloid pathway 21.91% Phenylpropanoid pathway 20.81% Flavonoid pathway 14.1% Steroid pathway 5.79% Rosmarinic acid pathway 5.7%
Family Distribution
C4H 6.43% UGT 5.55% BAHD 5.51% C3'H/CYP98A 5.15% 7DLGT 4.91% UFGT 4.77% POD 4.33% CYP76 4.01%
Other Families 59.34%
More Families (96)
IFS 142 2.85% F3H 142 2.85% 4CL 123 2.46% F3'H/CYP75B 114 2.28% T3O 104 2.08% CAD 97 1.94% G8O/G8H 96 1.92% CODM/T6ODM 90 1.8% DWF4/CYP90B1 90 1.8% CAS 88 1.76% NMT 81 1.62% BR6OX2/CYP85A2 80 1.6% TPS 75 1.5% STR 74 1.48% GES 73 1.46% SMT1/SMT2/SMT3 60 1.2% H6H 59 1.18% CSE 58 1.16% LAC 54 1.08% TRI/TRII 53 1.06% PYKS 47 0.94% FNS 45 0.9% 7DLH 43 0.86% IFR 43 0.86% T16H 39 0.78% F5H/CYP84A 38 0.76% PMT 37 0.74% HCT 37 0.74% CYP71 37 0.74% COR 36 0.72% COMT 36 0.72% GS 34 0.68% PAL 33 0.66% CCR 33 0.66% CYP90D1 32 0.64% RAS 31 0.62% NCS 30 0.6% F3'5'H/CYP75A 27 0.54% TAT 27 0.54% SGD 24 0.48% LAMT 24 0.48% CPD/CYP90A1 24 0.48% 16OMT 22 0.44% SLS 21 0.42% BBE 21 0.42% ANR 21 0.42% 8HGO 20 0.4% IO 19 0.38% DFR 19 0.38% BR6OX1/CYP85A1 18 0.36% CPR 17 0.34% MVD 15 0.3% HPPR 14 0.28% CYP719 13 0.26% CYP80B1 13 0.26% ANS/LDOX 13 0.26% MPO 11 0.22% GGPPS 11 0.22% ISY 10 0.2% CNMT 10 0.2% CCoAOMT 10 0.2% CHS 9 0.18% ROT3/CYP90C1 9 0.18% FLS 8 0.16% FPPS 8 0.16% AACT 8 0.16% SMO1/SMO2 7 0.14% SQS/FDFT1 7 0.14% DET2 7 0.14% DXS 7 0.14% MVK 7 0.14% HMGR 7 0.14% TYDC_DDC 6 0.12% CYP51G1 5 0.1% HMGS 5 0.1% TDC 4 0.08% CYP80F1 4 0.08% CHI 4 0.08% SQE 4 0.08% ADC 3 0.06% DWF5 3 0.06% PMK 3 0.06% DXR 3 0.06% XMT_MXMT_DXMT 2 0.04% ODC 2 0.04% 6OMT_4OMT_SOMT 2 0.04% FK 2 0.04% HYD1 2 0.04% DWF7 2 0.04% DWF1 2 0.04% CPI1 2 0.04% IDI 2 0.04% MDS/IspF 2 0.04% HDR/IspH 2 0.04% HDS/IspG 2 0.04% CMK/IspE 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 690 18 UGT (258) View species results
Alkaloid pathway 477 23 7DLGT (114) View species results
Phenylpropanoid pathway 453 13 POD (200) View species results
Flavonoid pathway 307 12 UFGT (219) View species results
Steroid pathway 126 13 CAS (70) View species results
Rosmarinic acid pathway 124 7 C4H (35) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1746 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 343 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HDS/IspG
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Gene Pathway Family Confidence Status Best Target
KAF8402742.1 Terpenoid HDS/IspG high pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH
KAF8412604.1 Terpenoid HDS/IspG medium pass HDS_IspG__00001__sp_F4K0E8_ISPG_ARATH