PlantSME Plant secondary metabolism enzyme database

Tetraena mongolica (tetraena_mongolica)

Imported from atlas release summary for Tetraena mongolica.

2452
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 28.67% Phenylpropanoid pathway 23.98% Alkaloid pathway 21.78% Flavonoid pathway 11.75% Rosmarinic acid pathway 7.59% Steroid pathway 6.24%
Family Distribution
BAHD 6.34% C3'H/CYP98A 6.0% C4H 5.73% POD 4.78% 4CL 4.44% T3O 3.83% IFS 3.57% UFGT 3.28%
Other Families 62.04%
More Families (96)
CYP76 202 3.25% UGT 197 3.17% 7DLGT 195 3.14% NMT 180 2.9% F3H 175 2.81% DWF4/CYP90B1 135 2.17% F3'H/CYP75B 131 2.11% BR6OX2/CYP85A2 126 2.03% STR 120 1.93% CODM/T6ODM 105 1.69% TRI/TRII 101 1.62% SMT1/SMT2/SMT3 91 1.46% LAC 88 1.42% H6H 81 1.3% CYP71 81 1.3% RAS 73 1.17% CSE 71 1.14% IFR 66 1.06% CAS 65 1.05% HCT 62 1.0% CAD 59 0.95% CYP90D1 57 0.92% PYKS 56 0.9% BBE 54 0.87% PAL 51 0.82% GS 49 0.79% PMT 42 0.68% T16H 42 0.68% GES 41 0.66% TPS 41 0.66% F5H/CYP84A 36 0.58% COR 35 0.56% SLS 35 0.56% ANR 34 0.55% COMT 34 0.55% CCR 33 0.53% TAT 33 0.53% IO 32 0.51% FNS 31 0.5% 7DLH 30 0.48% CYP51G1 30 0.48% FPPS 30 0.48% CPD/CYP90A1 29 0.47% SGD 28 0.45% G8O/G8H 28 0.45% F3'5'H/CYP75A 26 0.42% GGPPS 25 0.4% 16OMT 23 0.37% BR6OX1/CYP85A1 23 0.37% LAMT 22 0.35% CNMT 21 0.34% ROT3/CYP90C1 21 0.34% MVD 21 0.34% AACT 21 0.34% NCS 20 0.32% CPR 20 0.32% ANS/LDOX 18 0.29% 8HGO 17 0.27% CCoAOMT 17 0.27% CYP719 16 0.26% SQS/FDFT1 13 0.21% DFR 12 0.19% DXS 12 0.19% CYP80B1 11 0.18% TYDC_DDC 11 0.18% CHS 11 0.18% HPPR 10 0.16% SQE 10 0.16% HMGR 10 0.16% MVK 10 0.16% ISY 9 0.14% MPO 8 0.13% CHI 8 0.13% SMO1/SMO2 8 0.13% DET2 8 0.13% HDR/IspH 7 0.11% TDC 6 0.1% HYD1 6 0.1% HMGS 6 0.1% MCT/IspD 6 0.1% DWF1 5 0.08% XMT_MXMT_DXMT 4 0.06% ODC 4 0.06% DWF7 4 0.06% HDS/IspG 4 0.06% MDS/IspF 4 0.06% IDI 4 0.06% DXR 4 0.06% ADC 3 0.05% FK 3 0.05% CPI1 2 0.03% DWF5 2 0.03% CMK/IspE 2 0.03% PMK 2 0.03% 6OMT_4OMT_SOMT 1 0.02% GPPS 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 703 19 BAHD (307) View species results
Phenylpropanoid pathway 588 12 POD (284) View species results
Alkaloid pathway 534 22 NMT (96) View species results
Flavonoid pathway 288 9 UFGT (181) View species results
Rosmarinic acid pathway 186 7 4CL (46) View species results
Steroid pathway 153 12 SMT1/SMT2/SMT3 (58) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2280 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 529 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ISY
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Gene Pathway Family Confidence Status Best Target
tetraena_mongolica_TmoA01G015340.1 Alkaloid ISY medium pass ISY__00004__sp_A0A221J5W8_ISY1_NEPCA
tetraena_mongolica_TmoA02G001610.1 Alkaloid ISY medium pass ISY__00004__sp_A0A221J5W8_ISY1_NEPCA
tetraena_mongolica_TmoA02G011080.1 Alkaloid ISY medium pass ISY__00002__sp_A0A1C9CX66_CYC2_CAMAC
tetraena_mongolica_TmoA08G011930.1 Alkaloid ISY medium pass ISY__00002__sp_A0A1C9CX66_CYC2_CAMAC
tetraena_mongolica_TmoB01G014500.1 Alkaloid ISY medium pass ISY__00004__sp_A0A221J5W8_ISY1_NEPCA
tetraena_mongolica_TmoB02G001470.1 Alkaloid ISY medium pass ISY__00004__sp_A0A221J5W8_ISY1_NEPCA
tetraena_mongolica_TmoB02G010740.1 Alkaloid ISY medium pass ISY__00002__sp_A0A1C9CX66_CYC2_CAMAC
tetraena_mongolica_TmoB08G010740.1 Alkaloid ISY medium pass ISY__00002__sp_A0A1C9CX66_CYC2_CAMAC
tetraena_mongolica_Tmoptg000354lG000200.1 Alkaloid ISY medium pass ISY__00004__sp_A0A221J5W8_ISY1_NEPCA