PlantSME Plant secondary metabolism enzyme database

Tetralophozia filiformis (tetralophozia_filiformis)

Imported from atlas release summary for Tetralophozia filiformis.

661
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 24.36% Terpenoid pathway 24.36% Alkaloid pathway 20.73% Flavonoid pathway 11.8% Rosmarinic acid pathway 11.5% Steroid pathway 7.26%
Family Distribution
C4H 7.64% C3'H/CYP98A 6.95% CYP76 5.48% BAHD 4.36% 4CL 4.26% IFS 3.92% POD 3.18% BR6OX2/CYP85A2 2.94%
Other Families 61.26%
More Families (97)
NMT 57 2.79% T3O 57 2.79% STR 55 2.69% F3H 55 2.69% DWF4/CYP90B1 50 2.45% IFR 48 2.35% H6H 38 1.86% F3'H/CYP75B 38 1.86% TRI/TRII 35 1.71% GS 35 1.71% PAL 33 1.62% F3'5'H/CYP75A 30 1.47% IO 29 1.42% UFGT 29 1.42% UGT 29 1.42% 7DLGT 26 1.27% T16H 26 1.27% G8O/G8H 24 1.18% HCT 23 1.13% RAS 21 1.03% CODM/T6ODM 20 0.98% CAD 20 0.98% COMT 20 0.98% SMT1/SMT2/SMT3 20 0.98% FNS 17 0.83% TPS 17 0.83% BR6OX1/CYP85A1 16 0.78% CSE 15 0.73% CAS 15 0.73% CYP719 14 0.69% LAMT 13 0.64% ROT3/CYP90C1 13 0.64% SLS 12 0.59% ANR 12 0.59% F5H/CYP84A 12 0.59% CYP71 12 0.59% NCS 11 0.54% LAC 11 0.54% CPD/CYP90A1 11 0.54% SGD 10 0.49% CNMT 10 0.49% COR 10 0.49% PYKS 10 0.49% CYP80B1 9 0.44% TAT 9 0.44% CYP90D1 8 0.39% AACT 8 0.39% PMT 7 0.34% DFR 7 0.34% GGPPS 7 0.34% GES 6 0.29% 16OMT 6 0.29% ANS/LDOX 6 0.29% HPPR 6 0.29% DXS 6 0.29% 7DLH 5 0.24% BBE 5 0.24% CHS 5 0.24% CPR 5 0.24% DET2 5 0.24% ISY 4 0.2% MPO 4 0.2% CCR 4 0.2% SQS/FDFT1 4 0.2% FPPS 4 0.2% 8HGO 3 0.15% ADC 3 0.15% CCoAOMT 3 0.15% SMO1/SMO2 3 0.15% CYP51G1 3 0.15% PMK 3 0.15% IDI 3 0.15% MVK 3 0.15% TDC 2 0.1% XMT_MXMT_DXMT 2 0.1% TYDC_DDC 2 0.1% CHI 2 0.1% FK 2 0.1% HYD1 2 0.1% DWF7 2 0.1% DWF1 2 0.1% MDS/IspF 2 0.1% HMGR 2 0.1% HMGS 2 0.1% MCT/IspD 2 0.1% HDS/IspG 2 0.1% MVD 2 0.1% CYP80F1 1 0.05% ODC 1 0.05% 6OMT_4OMT_SOMT 1 0.05% CPI1 1 0.05% DWF5 1 0.05% SQE 1 0.05% CMK/IspE 1 0.05% DXR 1 0.05% HDR/IspH 1 0.05% GPPS 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 161 11 POD (59) View species results
Terpenoid pathway 161 19 BAHD (54) View species results
Alkaloid pathway 137 19 TRI/TRII (21) View species results
Flavonoid pathway 78 8 UFGT (24) View species results
Rosmarinic acid pathway 76 7 C4H (30) View species results
Steroid pathway 48 13 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 920 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 133 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Tfil2223410032310 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Tfil2245180033090 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Tfil2247210033380 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Tfil2275010043560 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Tfil2275040043810 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Tfil2300820130830 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Tfil2301070136040 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Tfil2301070136050 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Tfil2302950178890 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Tfil2303330189480 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Tfil2304410204690 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH