Thalictrum thalictroides (thalictrum_thalictroides)
Imported from atlas release summary for Thalictrum thalictroides.
1779
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1779
Candidate Genes
C4H
7.28%
C3'H/CYP98A
6.56%
CYP76
4.84%
IFS
4.3%
BAHD
4.28%
UGT
4.21%
T3O
3.67%
7DLGT
3.24%
Other Families
61.61%
More Families (98)
UFGT
138
3.0%
POD
137
2.98%
DWF4/CYP90B1
134
2.91%
F3'H/CYP75B
124
2.69%
4CL
117
2.54%
BR6OX2/CYP85A2
101
2.19%
NMT
91
1.98%
F3H
88
1.91%
CAS
84
1.82%
TPS
83
1.8%
GES
76
1.65%
CAD
71
1.54%
H6H
65
1.41%
STR
62
1.35%
SMT1/SMT2/SMT3
60
1.3%
CYP71
58
1.26%
T16H
57
1.24%
IO
49
1.06%
TRI/TRII
48
1.04%
CODM/T6ODM
46
1.0%
CYP90D1
45
0.98%
F5H/CYP84A
42
0.91%
SGD
41
0.89%
FNS
41
0.89%
COMT
38
0.83%
IFR
37
0.8%
GS
35
0.76%
HCT
35
0.76%
G8O/G8H
34
0.74%
LAC
33
0.72%
NCS
32
0.7%
RAS
32
0.7%
CSE
29
0.63%
SLS
28
0.61%
CYP80B1
27
0.59%
BBE
27
0.59%
7DLH
27
0.59%
F3'5'H/CYP75A
27
0.59%
CNMT
26
0.56%
CPD/CYP90A1
26
0.56%
PYKS
25
0.54%
16OMT
25
0.54%
CYP51G1
25
0.54%
PMT
23
0.5%
CCR
21
0.46%
ANS/LDOX
20
0.43%
PAL
18
0.39%
BR6OX1/CYP85A1
17
0.37%
MPO
16
0.35%
CYP719
15
0.33%
ANR
15
0.33%
ROT3/CYP90C1
15
0.33%
LAMT
12
0.26%
COR
12
0.26%
8HGO
12
0.26%
ISY
11
0.24%
DFR
11
0.24%
TAT
11
0.24%
CPR
11
0.24%
CHS
9
0.2%
HPPR
9
0.2%
6OMT_4OMT_SOMT
8
0.17%
SQS/FDFT1
8
0.17%
XMT_MXMT_DXMT
7
0.15%
MVK
7
0.15%
HDR/IspH
7
0.15%
FPPS
7
0.15%
GGPPS
7
0.15%
DET2
6
0.13%
PMK
6
0.13%
HMGR
6
0.13%
CHI
5
0.11%
SQE
5
0.11%
CPI1
5
0.11%
SMO1/SMO2
5
0.11%
TYDC_DDC
4
0.09%
FLS
4
0.09%
CCoAOMT
4
0.09%
DWF1
4
0.09%
HDS/IspG
4
0.09%
MVD
4
0.09%
ADC
3
0.07%
ODC
3
0.07%
CYP80F1
3
0.07%
DXS
3
0.07%
MCT/IspD
3
0.07%
GPPS
3
0.07%
AACT
3
0.07%
FK
2
0.04%
HYD1
2
0.04%
DWF5
2
0.04%
CMK/IspE
2
0.04%
DXR
2
0.04%
MDS/IspF
2
0.04%
IDI
2
0.04%
HMGS
2
0.04%
TDC
1
0.02%
DWF7
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 541 | 20 | UGT (171) | View species results |
| Alkaloid pathway | 423 | 26 | 7DLGT (67) | View species results |
| Phenylpropanoid pathway | 308 | 13 | POD (120) | View species results |
| Flavonoid pathway | 192 | 11 | UFGT (120) | View species results |
| Rosmarinic acid pathway | 175 | 7 | C4H (94) | View species results |
| Steroid pathway | 140 | 14 | CAS (77) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2081 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 264 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| KAF5175235.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| KAF5176143.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| KAF5176621.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| KAF5177408.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| KAF5179756.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| KAF5179757.1[Thalictrum | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| KAF5179758.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| KAF5180600.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| KAF5181984.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| KAF5182604.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| KAF5182606.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| KAF5183248.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00006__sp_Q9ZW03_TRNH3_ARATH |
| KAF5184341.1[Thalictrum | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| KAF5186460.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| KAF5187703.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| KAF5188233.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| KAF5188989.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| KAF5188990.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| KAF5189096.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| KAF5189239.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| KAF5190100.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| KAF5190310.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| KAF5193054.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| KAF5193055.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| KAF5193056.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| KAF5193147.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| KAF5193791.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| KAF5194021.1[Thalictrum | Alkaloid | TRI/TRII | medium | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| KAF5194108.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| KAF5194381.1[Thalictrum | Alkaloid | TRI/TRII | medium | borderline | TRI_TRII__00007__sp_Q9ZW16_TRNHA_ARATH |
| KAF5196664.1[Thalictrum | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| KAF5197104.1[Thalictrum | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| KAF5197203.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| KAF5197586.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| KAF5198811.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00001__sp_A7DY56_TRN1_COCOF |
| KAF5199918.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| KAF5202031.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| KAF5202060.1[Thalictrum | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| KAF5202929.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| KAF5203082.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00004__sp_H9BFQ2_TPRL3_ERYCB |
| KAF5204862.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00005__sp_P50162_TRN1_DATST |
| KAF5206300.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00009__sp_Q9ZW19_TRNHC_ARATH |
| KAF5206724.1[Thalictrum | Alkaloid | TRI/TRII | low | borderline | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| KAF5208110.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| KAF5208116.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00008__sp_Q9ZW18_SAG13_ARATH |
| KAF5208253.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |
| KAF5208254.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00002__sp_H9BFQ0_TPRL1_ERYCB |
| KAF5208257.1[Thalictrum | Alkaloid | TRI/TRII | medium | pass | TRI_TRII__00003__sp_H9BFQ1_TPRL2_ERYCB |