PlantSME Plant secondary metabolism enzyme database

Tripterygium wilfordii (tripterygium_wilfordii)

Imported from atlas release summary for Tripterygium wilfordii.

2312
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 31.44% Alkaloid pathway 24.26% Phenylpropanoid pathway 18.08% Flavonoid pathway 9.3% Rosmarinic acid pathway 9.21% Steroid pathway 7.7%
Family Distribution
BAHD 7.93% C4H 6.09% C3'H/CYP98A 6.04% IFS 3.98% T3O 3.68% CYP76 3.39% NMT 3.32% 4CL 3.09%
Other Families 62.49%
More Families (95)
POD 175 2.95% UFGT 152 2.56% UGT 144 2.43% 7DLGT 141 2.38% DWF4/CYP90B1 140 2.36% F3H 137 2.31% CYP71 135 2.28% SMT1/SMT2/SMT3 128 2.16% CAD 123 2.07% STR 119 2.01% CAS 113 1.91% BR6OX2/CYP85A2 104 1.75% F3'H/CYP75B 102 1.72% HCT 85 1.43% TPS 84 1.42% CODM/T6ODM 81 1.37% GES 78 1.32% TRI/TRII 74 1.25% TAT 69 1.16% RAS 67 1.13% H6H 62 1.05% IFR 56 0.94% SGD 53 0.89% LAC 53 0.89% LAMT 52 0.88% CSE 50 0.84% IO 49 0.83% CYP90D1 49 0.83% GS 48 0.81% T16H 44 0.74% PMT 43 0.73% COMT 41 0.69% CPD/CYP90A1 38 0.64% CCR 35 0.59% BBE 34 0.57% PYKS 34 0.57% F3'5'H/CYP75A 33 0.56% GGPPS 32 0.54% 16OMT 31 0.52% 7DLH 31 0.52% FNS 31 0.52% CYP51G1 30 0.51% G8O/G8H 28 0.47% ANR 28 0.47% 8HGO 27 0.46% SLS 23 0.39% CNMT 22 0.37% F5H/CYP84A 22 0.37% BR6OX1/CYP85A1 20 0.34% ROT3/CYP90C1 20 0.34% COR 18 0.3% NCS 18 0.3% DFR 18 0.3% PAL 18 0.3% CYP719 15 0.25% CPR 15 0.25% CYP80B1 14 0.24% FPPS 14 0.24% CCoAOMT 13 0.22% DXS 12 0.2% ISY 11 0.19% MPO 10 0.17% CHI 9 0.15% HPPR 9 0.15% SQE 9 0.15% SQS/FDFT1 9 0.15% DWF1 9 0.15% MVD 9 0.15% ANS/LDOX 8 0.13% DET2 8 0.13% CHS 7 0.12% PMK 7 0.12% AACT 7 0.12% MVK 7 0.12% SMO1/SMO2 6 0.1% HMGS 6 0.1% TYDC_DDC 5 0.08% ODC 4 0.07% MCT/IspD 4 0.07% HDS/IspG 4 0.07% TDC 3 0.05% ADC 3 0.05% DWF5 3 0.05% DXR 3 0.05% HMGR 3 0.05% FLS 2 0.03% CPI1 2 0.03% DWF7 2 0.03% FK 2 0.03% HDR/IspH 2 0.03% CMK/IspE 2 0.03% IDI 2 0.03% 6OMT_4OMT_SOMT 1 0.02% HYD1 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 727 19 BAHD (361) View species results
Alkaloid pathway 561 22 NMT (119) View species results
Phenylpropanoid pathway 418 12 POD (168) View species results
Flavonoid pathway 215 10 UFGT (138) View species results
Rosmarinic acid pathway 213 7 C4H (81) View species results
Steroid pathway 178 13 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2271 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 622 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHI
Reset
Gene Pathway Family Confidence Status Best Target
XP_038688926.1[Tripterygium Flavonoid CHI medium pass CHI__00003__sp_O65333_CFI_ELAUM
XP_038689260.1[Tripterygium Flavonoid CHI low borderline CHI__00009__sp_Q53B70_CF1B2_SOYBN
XP_038689261.1[Tripterygium Flavonoid CHI low borderline CHI__00009__sp_Q53B70_CF1B2_SOYBN
XP_038705382.1[Tripterygium Flavonoid CHI medium pass CHI__00001__sp_A0A2U7XUE3_CHIL2_HUMLU
XP_038710561.1[Tripterygium Flavonoid CHI low borderline CHI__00002__sp_A0A2U7XUH7_CHIL1_HUMLU
XP_038710562.1[Tripterygium Flavonoid CHI low borderline CHI__00002__sp_A0A2U7XUH7_CHIL1_HUMLU
XP_038710563.1[Tripterygium Flavonoid CHI low borderline CHI__00002__sp_A0A2U7XUH7_CHIL1_HUMLU
XP_038715004.1[Tripterygium Flavonoid CHI medium pass CHI__00002__sp_A0A2U7XUH7_CHIL1_HUMLU
XP_038721147.1[Tripterygium Flavonoid CHI medium pass CHI__00001__sp_A0A2U7XUE3_CHIL2_HUMLU