PlantSME Plant secondary metabolism enzyme database

Tritomaria exsectiformis (tritomaria_exsectiformis)

Imported from atlas release summary for Tritomaria exsectiformis.

593
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 24.79% Phenylpropanoid pathway 24.28% Alkaloid pathway 22.6% Flavonoid pathway 12.65% Rosmarinic acid pathway 9.27% Steroid pathway 6.41%
Family Distribution
C4H 5.92% C3'H/CYP98A 4.82% BAHD 4.82% 4CL 4.44% CYP76 4.12% POD 4.05% STR 3.99% NMT 3.34%
Other Families 64.5%
More Families (96)
IFS 47 3.02% F3H 47 3.02% IFR 39 2.51% UGT 39 2.51% 7DLGT 34 2.19% UFGT 33 2.12% BR6OX2/CYP85A2 33 2.12% T3O 32 2.06% H6H 32 2.06% GS 29 1.86% TRI/TRII 27 1.74% DWF4/CYP90B1 27 1.74% CSE 22 1.41% TPS 21 1.35% F3'H/CYP75B 20 1.29% IO 19 1.22% LAC 18 1.16% PYKS 17 1.09% CODM/T6ODM 17 1.09% HCT 17 1.09% CAD 17 1.09% CAS 17 1.09% COMT 16 1.03% SMT1/SMT2/SMT3 16 1.03% F3'5'H/CYP75A 15 0.96% RAS 14 0.9% CHS 13 0.84% T16H 12 0.77% PAL 12 0.77% SGD 11 0.71% G8O/G8H 10 0.64% CNMT 10 0.64% CPD/CYP90A1 10 0.64% COR 9 0.58% FNS 9 0.58% ANR 9 0.58% CYP71 9 0.58% PMK 9 0.58% NCS 8 0.51% CYP80B1 8 0.51% F5H/CYP84A 8 0.51% BR6OX1/CYP85A1 8 0.51% 7DLH 7 0.45% PMT 7 0.45% CYP90D1 7 0.45% FPPS 7 0.45% 8HGO 6 0.39% CYP719 6 0.39% ISY 6 0.39% GES 6 0.39% DFR 6 0.39% GGPPS 6 0.39% SLS 5 0.32% BBE 5 0.32% SQS/FDFT1 5 0.32% CYP51G1 5 0.32% MVD 5 0.32% HDR/IspH 5 0.32% LAMT 4 0.26% ANS/LDOX 4 0.26% HPPR 4 0.26% TAT 4 0.26% ROT3/CYP90C1 4 0.26% MCT/IspD 4 0.26% DXS 4 0.26% AACT 4 0.26% ADC 3 0.19% CHI 3 0.19% CCR 3 0.19% CPR 3 0.19% DET2 3 0.19% SMO1/SMO2 3 0.19% DWF7 3 0.19% MVK 3 0.19% HMGR 3 0.19% TDC 2 0.13% MPO 2 0.13% 16OMT 2 0.13% FLS 2 0.13% HYD1 2 0.13% FK 2 0.13% DWF1 2 0.13% GPPS 2 0.13% IDI 2 0.13% TYDC_DDC 1 0.06% 6OMT_4OMT_SOMT 1 0.06% ODC 1 0.06% CCoAOMT 1 0.06% CPI1 1 0.06% SQE 1 0.06% DWF5 1 0.06% DXR 1 0.06% CMK/IspE 1 0.06% HDS/IspG 1 0.06% MDS/IspF 1 0.06% HMGS 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 147 19 BAHD (50) View species results
Phenylpropanoid pathway 144 12 POD (56) View species results
Alkaloid pathway 134 20 NMT (20) View species results
Flavonoid pathway 75 11 UFGT (29) View species results
Rosmarinic acid pathway 55 7 C4H (27) View species results
Steroid pathway 38 10 CAS (15) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 523 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 106 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BAHD
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Gene Pathway Family Confidence Status Best Target
Texs4380980161970 Terpenoid BAHD low borderline BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Texs4381500163770 Terpenoid BAHD low borderline BAHD__00010__sp_A0AAW1LG41_BAHD1_SAPOF
Texs4385110173670 Terpenoid BAHD low borderline BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Texs4387170179350 Terpenoid BAHD medium pass BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Texs4387280179740 Terpenoid BAHD medium pass BAHD__00047__sp_Q5KS41_WSD11_ARATH
Texs4391600193940 Terpenoid BAHD medium pass BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Texs4404670209340 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Texs4404680209360 Terpenoid BAHD medium pass BAHD__00034__sp_P10349_GPAT2_CUCMO
Texs4650217790 Terpenoid BAHD medium pass BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Texs4700218380 Terpenoid BAHD low borderline BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Texs5000222260 Terpenoid BAHD low borderline BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Texs5010222300 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Texs5140223700 Terpenoid BAHD medium pass BAHD__00097__sp_Q9ZV87_NAPES_ARATH
Texs5180223830 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Texs520223990 Terpenoid BAHD low borderline BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Texs5990232390 Terpenoid BAHD low borderline BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Texs6080233210 Terpenoid BAHD medium pass BAHD__00055__sp_Q8H780_SCP13_ARATH
Texs6400236900 Terpenoid BAHD medium pass BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Texs6450237150 Terpenoid BAHD medium pass BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Texs650237700 Terpenoid BAHD medium pass BAHD__00092__sp_Q9SU91_LPXA_ARATH
Texs6530238260 Terpenoid BAHD medium pass BAHD__00025__sp_O64810_SCP10_ARATH
Texs6840241290 Terpenoid BAHD medium pass BAHD__00070__sp_Q9CAN8_MBOA2_ARATH
Texs7030243160 Terpenoid BAHD medium pass BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Texs7320245740 Terpenoid BAHD medium pass BAHD__00026__sp_O64811_SCP9_ARATH
Texs9410266820 Terpenoid BAHD medium pass BAHD__00023__sp_O22975_LPAAT_ARATH