PlantSME Plant secondary metabolism enzyme database

Tritomaria exsectiformis (tritomaria_exsectiformis)

Imported from atlas release summary for Tritomaria exsectiformis.

593
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 24.79% Phenylpropanoid pathway 24.28% Alkaloid pathway 22.6% Flavonoid pathway 12.65% Rosmarinic acid pathway 9.27% Steroid pathway 6.41%
Family Distribution
C4H 5.92% C3'H/CYP98A 4.82% BAHD 4.82% 4CL 4.44% CYP76 4.12% POD 4.05% STR 3.99% NMT 3.34%
Other Families 64.5%
More Families (96)
IFS 47 3.02% F3H 47 3.02% IFR 39 2.51% UGT 39 2.51% 7DLGT 34 2.19% UFGT 33 2.12% BR6OX2/CYP85A2 33 2.12% T3O 32 2.06% H6H 32 2.06% GS 29 1.86% TRI/TRII 27 1.74% DWF4/CYP90B1 27 1.74% CSE 22 1.41% TPS 21 1.35% F3'H/CYP75B 20 1.29% IO 19 1.22% LAC 18 1.16% PYKS 17 1.09% CODM/T6ODM 17 1.09% HCT 17 1.09% CAD 17 1.09% CAS 17 1.09% COMT 16 1.03% SMT1/SMT2/SMT3 16 1.03% F3'5'H/CYP75A 15 0.96% RAS 14 0.9% CHS 13 0.84% T16H 12 0.77% PAL 12 0.77% SGD 11 0.71% G8O/G8H 10 0.64% CNMT 10 0.64% CPD/CYP90A1 10 0.64% COR 9 0.58% FNS 9 0.58% ANR 9 0.58% CYP71 9 0.58% PMK 9 0.58% NCS 8 0.51% CYP80B1 8 0.51% F5H/CYP84A 8 0.51% BR6OX1/CYP85A1 8 0.51% 7DLH 7 0.45% PMT 7 0.45% CYP90D1 7 0.45% FPPS 7 0.45% 8HGO 6 0.39% CYP719 6 0.39% ISY 6 0.39% GES 6 0.39% DFR 6 0.39% GGPPS 6 0.39% SLS 5 0.32% BBE 5 0.32% SQS/FDFT1 5 0.32% CYP51G1 5 0.32% MVD 5 0.32% HDR/IspH 5 0.32% LAMT 4 0.26% ANS/LDOX 4 0.26% HPPR 4 0.26% TAT 4 0.26% ROT3/CYP90C1 4 0.26% MCT/IspD 4 0.26% DXS 4 0.26% AACT 4 0.26% ADC 3 0.19% CHI 3 0.19% CCR 3 0.19% CPR 3 0.19% DET2 3 0.19% SMO1/SMO2 3 0.19% DWF7 3 0.19% MVK 3 0.19% HMGR 3 0.19% TDC 2 0.13% MPO 2 0.13% 16OMT 2 0.13% FLS 2 0.13% HYD1 2 0.13% FK 2 0.13% DWF1 2 0.13% GPPS 2 0.13% IDI 2 0.13% TYDC_DDC 1 0.06% 6OMT_4OMT_SOMT 1 0.06% ODC 1 0.06% CCoAOMT 1 0.06% CPI1 1 0.06% SQE 1 0.06% DWF5 1 0.06% DXR 1 0.06% CMK/IspE 1 0.06% HDS/IspG 1 0.06% MDS/IspF 1 0.06% HMGS 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 147 19 BAHD (50) View species results
Phenylpropanoid pathway 144 12 POD (56) View species results
Alkaloid pathway 134 20 NMT (20) View species results
Flavonoid pathway 75 11 UFGT (29) View species results
Rosmarinic acid pathway 55 7 C4H (27) View species results
Steroid pathway 38 10 CAS (15) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 523 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 106 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
Reset
Gene Pathway Family Confidence Status
Texs10520004850 Alkaloid T3O medium pass
Texs11060009890 Alkaloid T3O medium borderline
Texs11700014600 Alkaloid T3O medium pass
Texs11940017640 Alkaloid T3O medium pass
Texs13120026150 Alkaloid T3O medium pass
Texs13540029650 Alkaloid T3O medium borderline
Texs2510050380 Alkaloid T3O medium pass
Texs2820055120 Alkaloid T3O medium borderline
Texs3686790068190 Alkaloid T3O medium borderline
Texs3795490071630 Alkaloid T3O low borderline
Texs4165390087170 Alkaloid T3O medium pass
Texs4213650090980 Alkaloid T3O medium borderline
Texs4269880096500 Alkaloid T3O medium borderline
Texs4283560098210 Alkaloid T3O medium pass
Texs4309300102790 Alkaloid T3O low borderline
Texs4319080105550 Alkaloid T3O medium borderline
Texs4336160111420 Alkaloid T3O medium borderline
Texs4339100112630 Alkaloid T3O medium borderline
Texs4341220113500 Alkaloid T3O medium pass
Texs4368950136050 Alkaloid T3O medium borderline
Texs4370500138820 Alkaloid T3O medium borderline
Texs4373750144700 Alkaloid T3O medium borderline
Texs4378540155630 Alkaloid T3O medium borderline
Texs4379290157740 Alkaloid T3O medium borderline
Texs4389090185790 Alkaloid T3O medium borderline
Texs4391070191850 Alkaloid T3O medium borderline
Texs4392750198370 Alkaloid T3O medium pass
Texs4394040201550 Alkaloid T3O medium borderline
Texs5060222920 Alkaloid T3O medium pass
Texs590231590 Alkaloid T3O medium pass
Texs7160244240 Alkaloid T3O medium borderline
Texs7850252640 Alkaloid T3O medium borderline