PlantSME Plant secondary metabolism enzyme database

Tritomaria exsectiformis (tritomaria_exsectiformis)

Imported from atlas release summary for Tritomaria exsectiformis.

873
Candidate Protein Records
593
Pathway-Level Records
1555
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 24.79% Phenylpropanoid pathway 24.28% Alkaloid pathway 22.6% Flavonoid pathway 12.65% Rosmarinic acid pathway 9.27% Steroid pathway 6.41%
Family Distribution
C4H 5.92% C3'H/CYP98A 4.82% BAHD 4.82% 4CL 4.44% CYP76 4.12% POD 4.05% STR 3.99% NMT 3.34%
Other Families 64.5%
More Families (96)
IFS 47 3.02% F3H 47 3.02% IFR 39 2.51% UGT 39 2.51% 7DLGT 34 2.19% UFGT 33 2.12% BR6OX2/CYP85A2 33 2.12% T3O 32 2.06% H6H 32 2.06% GS 29 1.86% TRI/TRII 27 1.74% DWF4/CYP90B1 27 1.74% CSE 22 1.41% TPS 21 1.35% F3'H/CYP75B 20 1.29% IO 19 1.22% LAC 18 1.16% PYKS 17 1.09% CODM/T6ODM 17 1.09% HCT 17 1.09% CAD 17 1.09% CAS 17 1.09% COMT 16 1.03% SMT1/SMT2/SMT3 16 1.03% F3'5'H/CYP75A 15 0.96% RAS 14 0.9% CHS 13 0.84% T16H 12 0.77% PAL 12 0.77% SGD 11 0.71% G8O/G8H 10 0.64% CNMT 10 0.64% CPD/CYP90A1 10 0.64% COR 9 0.58% FNS 9 0.58% ANR 9 0.58% CYP71 9 0.58% PMK 9 0.58% NCS 8 0.51% CYP80B1 8 0.51% F5H/CYP84A 8 0.51% BR6OX1/CYP85A1 8 0.51% 7DLH 7 0.45% PMT 7 0.45% CYP90D1 7 0.45% FPPS 7 0.45% 8HGO 6 0.39% CYP719 6 0.39% ISY 6 0.39% GES 6 0.39% DFR 6 0.39% GGPPS 6 0.39% SLS 5 0.32% BBE 5 0.32% SQS/FDFT1 5 0.32% CYP51G1 5 0.32% MVD 5 0.32% HDR/IspH 5 0.32% LAMT 4 0.26% ANS/LDOX 4 0.26% HPPR 4 0.26% TAT 4 0.26% ROT3/CYP90C1 4 0.26% MCT/IspD 4 0.26% DXS 4 0.26% AACT 4 0.26% ADC 3 0.19% CHI 3 0.19% CCR 3 0.19% CPR 3 0.19% DET2 3 0.19% SMO1/SMO2 3 0.19% DWF7 3 0.19% MVK 3 0.19% HMGR 3 0.19% TDC 2 0.13% MPO 2 0.13% 16OMT 2 0.13% FLS 2 0.13% HYD1 2 0.13% FK 2 0.13% DWF1 2 0.13% GPPS 2 0.13% IDI 2 0.13% TYDC_DDC 1 0.06% 6OMT_4OMT_SOMT 1 0.06% ODC 1 0.06% CCoAOMT 1 0.06% CPI1 1 0.06% SQE 1 0.06% DWF5 1 0.06% DXR 1 0.06% CMK/IspE 1 0.06% HDS/IspG 1 0.06% MDS/IspF 1 0.06% HMGS 1 0.06%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 147 19 BAHD (50) View species results
Phenylpropanoid pathway 144 12 POD (56) View species results
Alkaloid pathway 134 20 NMT (20) View species results
Flavonoid pathway 75 11 UFGT (29) View species results
Rosmarinic acid pathway 55 7 C4H (27) View species results
Steroid pathway 38 10 CAS (15) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 523 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 106 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Texs8370257350 Alkaloid PYKS low borderline
Texs1780043430 Alkaloid SGD low borderline
Texs1900044800 Alkaloid SGD low borderline
Texs2610051970 Alkaloid SGD medium pass
Texs3808380073510 Alkaloid SGD medium pass
Texs4050080590 Alkaloid SGD low borderline
Texs4059290081700 Alkaloid SGD low borderline
Texs4360280127690 Alkaloid SGD medium pass
Texs4387440180130 Alkaloid SGD medium pass
Texs4391690194330 Alkaloid SGD medium pass
Texs4394370202160 Alkaloid SGD low borderline
Texs7090243640 Alkaloid SGD medium pass
Texs4244010094430 Alkaloid SLS medium borderline
Texs4345490116100 Alkaloid SLS medium borderline
Texs4372550142360 Alkaloid SLS medium borderline
Texs4390460189930 Alkaloid SLS medium borderline
Texs4930221370 Alkaloid SLS medium borderline
Texs1010000690 Alkaloid STR low borderline
Texs1010000750 Alkaloid STR low borderline
Texs1050004610 Alkaloid STR low borderline
Texs11880016760 Alkaloid STR low borderline
Texs1410037410 Alkaloid STR low borderline
Texs2810054830 Alkaloid STR medium pass
Texs3070057770 Alkaloid STR low borderline
Texs3140059880 Alkaloid STR low borderline
Texs3480064520 Alkaloid STR low borderline
Texs3550065620 Alkaloid STR medium pass
Texs3840074680 Alkaloid STR low borderline
Texs4008970077970 Alkaloid STR low borderline
Texs4045910079770 Alkaloid STR low borderline
Texs4053050081250 Alkaloid STR low borderline
Texs4217700091390 Alkaloid STR medium pass
Texs4230700092780 Alkaloid STR low borderline
Texs4320950106040 Alkaloid STR low borderline
Texs4338870112410 Alkaloid STR low borderline
Texs4341720113830 Alkaloid STR medium pass
Texs4342450114280 Alkaloid STR low borderline
Texs4343720115010 Alkaloid STR low borderline
Texs4353320120860 Alkaloid STR low borderline
Texs4354420121610 Alkaloid STR low borderline
Texs4356160123850 Alkaloid STR low borderline
Texs4356920124350 Alkaloid STR low borderline
Texs4360560127870 Alkaloid STR low borderline
Texs4361550128770 Alkaloid STR low borderline
Texs4361790128850 Alkaloid STR low borderline
Texs4362660129410 Alkaloid STR low borderline
Texs4366640133690 Alkaloid STR medium pass
Texs4368160135190 Alkaloid STR low borderline
Texs4370138210 Alkaloid STR low borderline
Texs4370460138800 Alkaloid STR low borderline