PlantSME Plant secondary metabolism enzyme database

Vaccinium myrtillus (vaccinium_myrtillus)

Imported from atlas release summary for Vaccinium myrtillus.

2087
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 30.47% Alkaloid pathway 21.47% Phenylpropanoid pathway 18.54% Flavonoid pathway 13.13% Rosmarinic acid pathway 9.97% Steroid pathway 6.42%
Family Distribution
C4H 7.06% C3'H/CYP98A 6.48% UGT 5.43% BAHD 4.75% 7DLGT 4.34% IFS 4.24% CYP76 4.16% UFGT 3.85%
Other Families 59.7%
More Families (95)
4CL 174 3.38% T3O 169 3.29% F3H 146 2.84% POD 143 2.78% DWF4/CYP90B1 118 2.3% BR6OX2/CYP85A2 107 2.08% CAD 104 2.02% F3'H/CYP75B 99 1.93% CAS 87 1.69% CODM/T6ODM 83 1.61% NMT 83 1.61% STR 79 1.54% H6H 74 1.44% GS 69 1.34% CYP71 63 1.23% IO 61 1.19% HCT 56 1.09% TPS 55 1.07% LAC 54 1.05% SMT1/SMT2/SMT3 51 0.99% GES 50 0.97% T16H 48 0.93% G8O/G8H 45 0.88% RAS 45 0.88% SLS 44 0.86% CYP90D1 44 0.86% IFR 41 0.8% TRI/TRII 40 0.78% TAT 40 0.78% PYKS 38 0.74% SGD 37 0.72% BR6OX1/CYP85A1 35 0.68% F3'5'H/CYP75A 33 0.64% COMT 32 0.62% ANR 31 0.6% PMT 30 0.58% FNS 30 0.58% 7DLH 28 0.54% CSE 28 0.54% F5H/CYP84A 26 0.51% COR 25 0.49% CCR 25 0.49% 8HGO 24 0.47% CPD/CYP90A1 23 0.45% CYP51G1 21 0.41% 16OMT 18 0.35% HPPR 17 0.33% CHS 16 0.31% PAL 15 0.29% AACT 15 0.29% MPO 14 0.27% DFR 14 0.27% DET2 14 0.27% ROT3/CYP90C1 13 0.25% ANS/LDOX 12 0.23% LAMT 11 0.21% FPPS 11 0.21% NCS 10 0.19% GGPPS 10 0.19% CYP80B1 8 0.16% MVK 8 0.16% CYP719 7 0.14% TYDC_DDC 7 0.14% CPR 7 0.14% DWF7 7 0.14% MVD 7 0.14% CNMT 6 0.12% SMO1/SMO2 6 0.12% ISY 5 0.1% CCoAOMT 5 0.1% SQE 5 0.1% DXS 5 0.1% PMK 5 0.1% GPPS 5 0.1% TDC 4 0.08% ODC 4 0.08% CHI 4 0.08% SQS/FDFT1 4 0.08% DWF1 3 0.06% HYD1 3 0.06% MCT/IspD 3 0.06% HMGR 3 0.06% DXR 3 0.06% BBE 2 0.04% DWF5 2 0.04% HDR/IspH 2 0.04% CMK/IspE 2 0.04% MDS/IspF 2 0.04% ADC 1 0.02% FLS 1 0.02% CPI1 1 0.02% FK 1 0.02% IDI 1 0.02% HMGS 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 636 21 UGT (256) View species results
Alkaloid pathway 448 21 7DLGT (91) View species results
Phenylpropanoid pathway 387 11 POD (136) View species results
Flavonoid pathway 274 12 UFGT (177) View species results
Rosmarinic acid pathway 208 7 C4H (89) View species results
Steroid pathway 134 11 CAS (76) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2120 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 345 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ODC
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Gene Pathway Family Confidence Status
vaccinium_myrtillus_Vmy07g25899.t1 Alkaloid ODC low borderline
vaccinium_myrtillus_Vmy07g26280.t1 Alkaloid ODC medium pass
vaccinium_myrtillus_Vmy07g26282.t1 Alkaloid ODC medium pass
vaccinium_myrtillus_Vmy11g4644.t1 Alkaloid ODC low borderline