PlantSME Plant secondary metabolism enzyme database

Vetaforma dusenii (vetaforma_dusenii)

Imported from atlas release summary for Vetaforma dusenii.

734
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Current group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Phenylpropanoid pathway 24.8% Terpenoid pathway 23.02% Alkaloid pathway 21.53% Flavonoid pathway 13.08% Rosmarinic acid pathway 11.99% Steroid pathway 5.59%
Family Distribution
C4H 6.57% C3'H/CYP98A 5.9% BAHD 5.57% 4CL 5.47% POD 4.65% CYP76 4.32% IFS 3.26% T3O 3.21%
Other Families 61.04%
More Families (95)
NMT 58 2.78% DWF4/CYP90B1 58 2.78% F3H 53 2.54% BR6OX2/CYP85A2 53 2.54% STR 52 2.5% IFR 47 2.26% GS 39 1.87% PAL 39 1.87% F3'H/CYP75B 36 1.73% H6H 35 1.68% TRI/TRII 34 1.63% UGT 33 1.58% UFGT 30 1.44% T16H 28 1.34% 7DLGT 28 1.34% HCT 28 1.34% RAS 27 1.3% AACT 26 1.25% G8O/G8H 22 1.06% F3'5'H/CYP75A 21 1.01% PYKS 20 0.96% CODM/T6ODM 20 0.96% SMT1/SMT2/SMT3 20 0.96% CCoAOMT 18 0.86% BR6OX1/CYP85A1 18 0.86% TAT 17 0.82% CNMT 16 0.77% FNS 16 0.77% CAD 16 0.77% ANR 15 0.72% CYP71 15 0.72% CHS 14 0.67% COMT 14 0.67% CSE 14 0.67% GGPPS 13 0.62% CCR 12 0.58% CAS 11 0.53% TPS 11 0.53% SGD 10 0.48% DFR 10 0.48% CPR 10 0.48% SLS 9 0.43% CYP80B1 9 0.43% IO 9 0.43% LAMT 9 0.43% NCS 8 0.38% SQS/FDFT1 8 0.38% CPD/CYP90A1 8 0.38% CYP90D1 8 0.38% 7DLH 7 0.34% LAC 7 0.34% CYP719 6 0.29% 8HGO 6 0.29% DXS 6 0.29% MVK 6 0.29% GES 5 0.24% COR 5 0.24% HPPR 5 0.24% MCT/IspD 5 0.24% GPPS 5 0.24% TDC 4 0.19% MPO 4 0.19% F5H/CYP84A 4 0.19% DWF7 4 0.19% SMO1/SMO2 4 0.19% FPPS 4 0.19% ADC 3 0.14% 16OMT 3 0.14% TYDC_DDC 3 0.14% PMT 3 0.14% CYP51G1 3 0.14% DWF1 3 0.14% ROT3/CYP90C1 3 0.14% DET2 3 0.14% MVD 3 0.14% HMGS 3 0.14% ODC 2 0.1% 6OMT_4OMT_SOMT 2 0.1% ANS/LDOX 2 0.1% CHI 2 0.1% FLS 2 0.1% FK 2 0.1% HDS/IspG 2 0.1% DXR 2 0.1% IDI 2 0.1% HMGR 2 0.1% HDR/IspH 2 0.1% ISY 1 0.05% CYP80F1 1 0.05% BBE 1 0.05% SQE 1 0.05% HYD1 1 0.05% CMK/IspE 1 0.05% MDS/IspF 1 0.05% PMK 1 0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 182 11 POD (83) View species results
Terpenoid pathway 169 21 BAHD (67) View species results
Alkaloid pathway 158 22 T3O (27) View species results
Flavonoid pathway 96 10 UFGT (28) View species results
Rosmarinic acid pathway 88 7 C4H (29) View species results
Steroid pathway 41 12 SMT1/SMT2/SMT3 (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 803 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 171 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Vdus5838210025750 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Vdus5852570026720 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Vdus7426920138130 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Vdus7437250141360 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Vdus7562270174770 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
Vdus7566260176020 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Vdus7633770197300 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH