Vitis amurensis (vitis_amurensis)
Imported from atlas release summary for Vitis amurensis.
2266
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2266
Candidate Genes
C4H
6.18%
BAHD
5.3%
UGT
5.09%
7DLGT
4.42%
C3'H/CYP98A
4.36%
UFGT
4.26%
POD
3.38%
CYP76
3.3%
Other Families
63.71%
More Families (98)
IFS
144
2.76%
4CL
141
2.71%
PAL
123
2.36%
CAD
119
2.28%
F3H
118
2.27%
F3'H/CYP75B
105
2.02%
NMT
104
2.0%
T3O
103
1.98%
STR
99
1.9%
CAS
98
1.88%
CODM/T6ODM
82
1.57%
PYKS
82
1.57%
DWF4/CYP90B1
77
1.48%
G8O/G8H
74
1.42%
SMT1/SMT2/SMT3
73
1.4%
TPS
71
1.36%
GES
67
1.29%
BR6OX2/CYP85A2
66
1.27%
TRI/TRII
62
1.19%
COMT
62
1.19%
CHS
59
1.13%
GS
55
1.06%
16OMT
46
0.88%
SGD
45
0.86%
H6H
45
0.86%
F3'5'H/CYP75A
45
0.86%
IO
44
0.84%
CYP71
43
0.83%
T16H
42
0.81%
DFR
42
0.81%
NCS
41
0.79%
HCT
41
0.79%
LAC
41
0.79%
IFR
40
0.77%
FNS
39
0.75%
ANR
39
0.75%
F5H/CYP84A
38
0.73%
PMT
34
0.65%
7DLH
31
0.6%
CSE
31
0.6%
COR
30
0.58%
RAS
30
0.58%
LAMT
29
0.56%
BBE
29
0.56%
TAT
28
0.54%
CPD/CYP90A1
28
0.54%
CCR
27
0.52%
CYP90D1
27
0.52%
SLS
24
0.46%
ANS/LDOX
22
0.42%
BR6OX1/CYP85A1
20
0.38%
DET2
20
0.38%
8HGO
19
0.36%
CPR
19
0.36%
CYP80B1
16
0.31%
TYDC_DDC
16
0.31%
CYP51G1
15
0.29%
CNMT
14
0.27%
AACT
12
0.23%
GGPPS
11
0.21%
MPO
10
0.19%
DWF1
10
0.19%
DXS
10
0.19%
DWF7
8
0.15%
ADC
7
0.13%
ISY
7
0.13%
CCoAOMT
7
0.13%
HPPR
7
0.13%
ROT3/CYP90C1
7
0.13%
HMGS
7
0.13%
FPPS
7
0.13%
CYP719
6
0.12%
6OMT_4OMT_SOMT
6
0.12%
FLS
5
0.1%
SQS/FDFT1
5
0.1%
MVD
5
0.1%
TDC
4
0.08%
CYP80F1
4
0.08%
ODC
4
0.08%
SMO1/SMO2
4
0.08%
SQE
4
0.08%
HDR/IspH
4
0.08%
HMGR
4
0.08%
MVK
4
0.08%
XMT_MXMT_DXMT
3
0.06%
CHI
3
0.06%
DWF5
2
0.04%
MDS/IspF
2
0.04%
MCT/IspD
2
0.04%
PMK
2
0.04%
IDI
2
0.04%
CMK/IspE
2
0.04%
GPPS
2
0.04%
FK
1
0.02%
HYD1
1
0.02%
CPI1
1
0.02%
HDS/IspG
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 636 | 21 | UGT (249) | View species results |
| Alkaloid pathway | 548 | 25 | 7DLGT (96) | View species results |
| Phenylpropanoid pathway | 413 | 12 | POD (152) | View species results |
| Flavonoid pathway | 378 | 12 | UFGT (198) | View species results |
| Steroid pathway | 148 | 12 | CAS (74) | View species results |
| Rosmarinic acid pathway | 143 | 7 | PAL (38) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1680 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 347 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| vitis_amurensis_VAG0115376.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0116899.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0117095.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0118034.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0118828.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0118832.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0118833.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0118834.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0118835.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0120999.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0121319.1 | Alkaloid | CODM/T6ODM | low | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0122239.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0122683.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0122684.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0124948.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0125915.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0126068.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0126069.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0126622.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0126623.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0126803.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0126804.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0126806.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0127247.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0127248.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0128860.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0129785.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00001__sp_D4N500_DIOX1_PAPSO |
| vitis_amurensis_VAG0129887.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0130143.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0130144.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0130417.1 | Alkaloid | CODM/T6ODM | low | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |
| vitis_amurensis_VAG0131838.1 | Alkaloid | CODM/T6ODM | medium | borderline | CODM_T6ODM__00002__sp_D4N502_DIOX3_PAPSO |