PlantSME Plant secondary metabolism enzyme database

Vitis berlandieri x rupestris (vitis_berlandieri_x_rupestris)

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Imported from atlas release summary for Vitis berlandieri x rupestris.

2178
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 578 20 UGT (221) View species results
Alkaloid pathway 506 23 7DLGT (87) View species results
Phenylpropanoid pathway 406 12 POD (129) View species results
Flavonoid pathway 325 8 UFGT (202) View species results
Rosmarinic acid pathway 239 7 C4H (133) View species results
Steroid pathway 124 12 CAS (70) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2574 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 289 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr01.ver1.0.g004690.p01 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr01.ver1.0.g004710.p01 Alkaloid NMT medium borderline NMT__00059__sp_Q9M571_PEAMT_SPIOL
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr01.ver1.0.g009980.p01 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr01.ver1.0.g010280.p01 Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr01.ver1.0.g014540.p01 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr02.ver1.0.g017620.p01 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr02.ver1.0.g017630.p01 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr02.ver1.0.g020610.p01 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr02.ver1.0.g021420.p01 Alkaloid NMT low borderline NMT__00046__sp_Q8VZ17_SUVH6_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr03.ver1.0.g028830.p01 Alkaloid NMT medium borderline NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g043440.p01 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g046430.p01 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g049450.p01 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g049640.p01 Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g051000.p01 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g051690.p01 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g052050.p01 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g052070.p01 Alkaloid NMT medium borderline NMT__00052__sp_Q9AVJ9_MXMT1_COFAR
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g053310.p01 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr04.ver1.0.g055380.p01 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr05.ver1.0.g059240.p01 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr05.ver1.0.g063640.p01 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr05.ver1.0.g063650.p01 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr05.ver1.0.g063750.p01 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr05.ver1.0.g064150.p01 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr05.ver1.0.g067720.p01 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr06.ver1.0.g073600.p01 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr06.ver1.0.g083420.p01 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr07.ver1.0.g089650.p01 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr07.ver1.0.g092260.p01 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr07.ver1.0.g102030.p01 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr08.ver1.0.g106260.p01 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr08.ver1.0.g110100.p01 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr08.ver1.0.g116980.p01 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr08.ver1.0.g120670.p01 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr09.ver1.0.g131040.p01 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr10.ver1.0.g137100.p01 Alkaloid NMT low borderline NMT__00017__sp_F4K1J4_ATXR7_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr10.ver1.0.g138440.p01 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr10.ver1.0.g143020.p01 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr10.ver1.0.g144790.p01 Alkaloid NMT low borderline NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr10.ver1.0.g147530.p01 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr11.ver1.0.g150850.p01 Alkaloid NMT medium pass NMT__00066__sp_Q9SU94_ANM11_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr11.ver1.0.g152940.p01 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr11.ver1.0.g156080.p01 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr11.ver1.0.g156540.p01 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr12.ver1.0.g165370.p01 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr12.ver1.0.g165770.p01 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr13.ver1.0.g182020.p01 Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr13.ver1.0.g184780.p01 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
vitis_berlandieri_x_rupestris_VITVix110R_v1.0.hap_Vbe.chr13.ver1.0.g186620.p01 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH