PlantSME Plant secondary metabolism enzyme database

Vitis rupestris x riparia (vitis_rupestris_x_riparia)

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Imported from atlas release summary for Vitis rupestris x riparia.

2253
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 620 20 UGT (231) View species results
Alkaloid pathway 512 26 7DLGT (98) View species results
Phenylpropanoid pathway 427 12 POD (140) View species results
Flavonoid pathway 332 11 UFGT (202) View species results
Rosmarinic acid pathway 224 7 C4H (122) View species results
Steroid pathway 138 13 CAS (81) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2197 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 261 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr13.ver1.0.g217930.p01 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr13.ver1.0.g217940.p01 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr13.ver1.0.g222110.p01 Alkaloid NMT medium pass NMT__00053__sp_Q9C6B9_PEAM3_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr13.ver1.0.g222130.p01 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr14.ver1.0.g236600.p01 Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr14.ver1.0.g237480.p01 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr15.ver1.0.g246350.p01 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr15.ver1.0.g250340.p01 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr15.ver1.0.g256810.p01 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr16.ver1.0.g260020.p01 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr16.ver1.0.g260570.p01 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr16.ver1.0.g263870.p01 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr16.ver1.0.g264240.p01 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr16.ver1.0.g277110.p01 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr16.ver1.0.g278230.p01 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr17.ver1.0.g281100.p01 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g303480.p01 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g304010.p01 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g316250.p01 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g316260.p01 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g316780.p01 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g316790.p01 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr18.ver1.0.g320480.p01 Alkaloid NMT low borderline NMT__00039__sp_Q84W92_ANM13_ARATH
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr19.ver1.0.g323590.p01 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr19.ver1.0.g329700.p01 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH