Vitis rupestris x riparia (vitis_rupestris_x_riparia)
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Imported from atlas release summary for Vitis rupestris x riparia.
2253
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2253
Candidate Genes
C4H
6.94%
C3'H/CYP98A
6.58%
CYP76
5.03%
UGT
4.59%
IFS
4.5%
7DLGT
4.17%
UFGT
4.08%
BAHD
3.96%
Other Families
60.14%
More Families (97)
T3O
167
3.18%
POD
145
2.76%
DWF4/CYP90B1
144
2.74%
F3H
138
2.63%
CAD
120
2.29%
F3'H/CYP75B
106
2.02%
4CL
99
1.89%
BR6OX2/CYP85A2
97
1.85%
LAC
94
1.79%
CAS
93
1.77%
CODM/T6ODM
90
1.72%
STR
88
1.68%
PAL
81
1.54%
TPS
76
1.45%
NMT
75
1.43%
PYKS
72
1.37%
GES
72
1.37%
G8O/G8H
62
1.18%
IO
59
1.12%
TRI/TRII
56
1.07%
SMT1/SMT2/SMT3
54
1.03%
H6H
52
0.99%
CYP71
51
0.97%
CHS
50
0.95%
T16H
49
0.93%
GS
42
0.8%
ANR
42
0.8%
CYP90D1
37
0.71%
FNS
36
0.69%
IFR
34
0.65%
COMT
32
0.61%
HCT
31
0.59%
CPD/CYP90A1
31
0.59%
BBE
29
0.55%
F3'5'H/CYP75A
29
0.55%
TAT
29
0.55%
SGD
28
0.53%
7DLH
28
0.53%
CYP51G1
28
0.53%
LAMT
27
0.51%
NCS
26
0.5%
SLS
26
0.5%
CSE
26
0.5%
PMT
24
0.46%
COR
23
0.44%
CCR
23
0.44%
DFR
22
0.42%
F5H/CYP84A
22
0.42%
RAS
22
0.42%
16OMT
21
0.4%
BR6OX1/CYP85A1
20
0.38%
8HGO
12
0.23%
CNMT
11
0.21%
TYDC_DDC
11
0.21%
ROT3/CYP90C1
10
0.19%
MPO
9
0.17%
CYP80B1
9
0.17%
CCoAOMT
9
0.17%
CPR
9
0.17%
ISY
8
0.15%
HMGS
8
0.15%
GGPPS
8
0.15%
AACT
8
0.15%
CYP719
7
0.13%
DXS
7
0.13%
CYP80F1
6
0.11%
HPPR
6
0.11%
SQE
6
0.11%
XMT_MXMT_DXMT
5
0.1%
FLS
5
0.1%
DWF7
5
0.1%
SQS/FDFT1
5
0.1%
FPPS
5
0.1%
ADC
4
0.08%
6OMT_4OMT_SOMT
4
0.08%
ANS/LDOX
4
0.08%
DET2
4
0.08%
MVK
4
0.08%
CHI
3
0.06%
SMO1/SMO2
3
0.06%
MDS/IspF
3
0.06%
HMGR
3
0.06%
CMK/IspE
3
0.06%
MVD
3
0.06%
TDC
2
0.04%
ODC
2
0.04%
DWF1
2
0.04%
DWF5
2
0.04%
MCT/IspD
2
0.04%
HDR/IspH
2
0.04%
IDI
2
0.04%
HYD1
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
PMK
1
0.02%
HDS/IspG
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 620 | 20 | UGT (231) | View species results |
| Alkaloid pathway | 512 | 26 | 7DLGT (98) | View species results |
| Phenylpropanoid pathway | 427 | 12 | POD (140) | View species results |
| Flavonoid pathway | 332 | 11 | UFGT (202) | View species results |
| Rosmarinic acid pathway | 224 | 7 | C4H (122) | View species results |
| Steroid pathway | 138 | 13 | CAS (81) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2197 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 261 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132120.p01 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132130.p01 | Terpenoid | UGT | low | borderline | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132140.p01 | Terpenoid | UGT | medium | pass | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132150.p01 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132170.p01 | Terpenoid | UGT | medium | pass | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132180.p01 | Terpenoid | UGT | medium | pass | UGT__00111__sp_Q9ZQ99_U73C1_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132190.p01 | Terpenoid | UGT | medium | pass | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132200.p01 | Terpenoid | UGT | medium | pass | UGT__00044__sp_K4GIP0_73C12_BARVU |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132220.p01 | Terpenoid | UGT | medium | pass | UGT__00042__sp_K4GHR9_UGT1_BARVU |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132230.p01 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g132820.p01 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g136710.p01 | Terpenoid | UGT | medium | pass | UGT__00002__sp_A0A067YBQ3_UGT13_PUEML |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g136730.p01 | Terpenoid | UGT | medium | pass | UGT__00013__sp_A0A172J2D0_UGT2_PUEML |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr08.ver1.0.g136740.p01 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr09.ver1.0.g144310.p01 | Terpenoid | UGT | medium | pass | UGT__00031__sp_F8WKW0_UGT1_GARJA |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr09.ver1.0.g151170.p01 | Terpenoid | UGT | medium | pass | UGT__00046__sp_K4GMD6_73C9_BARVU |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr09.ver1.0.g151180.p01 | Terpenoid | UGT | low | borderline | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr09.ver1.0.g151190.p01 | Terpenoid | UGT | medium | pass | UGT__00046__sp_K4GMD6_73C9_BARVU |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr10.ver1.0.g167610.p01 | Terpenoid | UGT | low | borderline | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr10.ver1.0.g167620.p01 | Terpenoid | UGT | low | borderline | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr11.ver1.0.g177110.p01 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr11.ver1.0.g177120.p01 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr11.ver1.0.g177130.p01 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr11.ver1.0.g177140.p01 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr11.ver1.0.g187330.p01 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr11.ver1.0.g187340.p01 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr11.ver1.0.g187360.p01 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr11.ver1.0.g187370.p01 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g196880.p01 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198540.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198550.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198560.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198570.p01 | Terpenoid | UGT | medium | pass | UGT__00051__sp_O23382_U71B5_ARATH |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198580.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198600.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198610.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198620.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198630.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198640.p01 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198670.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198680.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198690.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198730.p01 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198750.p01 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198760.p01 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198820.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198850.p01 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198860.p01 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198870.p01 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |
| vitis_rupestris_x_riparia_VITVix101-14Mgt_v1.0.hap_Vrp.chr12.ver1.0.g198910.p01 | Terpenoid | UGT | medium | pass | UGT__00028__sp_D3UAG1_U7A16_PYRCO |