PlantSME Plant secondary metabolism enzyme database

Vitis vinifera (vitis_vinifera)

Imported from atlas release summary for Vitis vinifera.

2428
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 668 20 UGT (240) View species results
Alkaloid pathway 580 21 7DLGT (116) View species results
Phenylpropanoid pathway 453 12 POD (134) View species results
Flavonoid pathway 350 12 UFGT (217) View species results
Rosmarinic acid pathway 195 7 C4H (108) View species results
Steroid pathway 182 14 CAS (117) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2025 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 276 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
VIT_12s0059g02740.t01 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
VIT_13s0047g00120.t01 Alkaloid NMT medium pass NMT__00054__sp_Q9FF80_SUVH1_ARATH
VIT_13s0064g00440.t01 Alkaloid NMT low borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
VIT_13s0074g00220.t01 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
VIT_13s0084g00650.t01 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
VIT_14s0066g01450.t01 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
VIT_14s0068g01090.t01 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
VIT_15s0021g00230.t01 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
VIT_15s0046g00760.t01 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
VIT_15s0048g02460.t01 Alkaloid NMT medium borderline NMT__00011__sp_A9X7L0_ANMT_RUTGR
VIT_16s0013g00310.t01 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
VIT_16s0013g00650.t01 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
VIT_16s0022g01290.t01 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
VIT_16s0039g00740.t01 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
VIT_16s0039g01410.t01 Alkaloid NMT medium borderline NMT__00002__sp_A0A075D6M1_NNMT_RAUSE
VIT_16s0098g00350.t01 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
VIT_16s0098g00850.t01 Alkaloid NMT medium borderline NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
VIT_16s0098g01510.t01 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
VIT_17s0000g02430.t01 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
VIT_18s0001g00810.t01 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
VIT_18s0001g01700.t01 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
VIT_18s0001g01740.t01 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
VIT_18s0072g00200.t01 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
VIT_18s0072g00210.t01 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
VIT_18s0072g00220.t01 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
VIT_18s0089g00730.t01 Alkaloid NMT low borderline NMT__00020__sp_O23372_ATXR3_ARATH
VIT_19s0014g00230.t01 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ