PlantSME Plant secondary metabolism enzyme database

Vitis vinifera (vitis_vinifera)

Imported from atlas release summary for Vitis vinifera.

2439
Candidate Protein Records
2428
Pathway-Level Records
5360
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 668 20 UGT (240) View species results
Alkaloid pathway 580 21 7DLGT (116) View species results
Phenylpropanoid pathway 453 12 POD (134) View species results
Flavonoid pathway 350 12 UFGT (217) View species results
Rosmarinic acid pathway 195 7 C4H (108) View species results
Steroid pathway 182 14 CAS (117) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2025 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 276 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
VIT_00s0299g00040.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_02s0012g00320.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_02s0012g00350.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_02s0012g00360.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_02s0012g00380.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_02s0012g00390.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_02s0012g00400.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_02s0012g00410.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_02s0012g00430.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_02s0012g00440.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_05s0077g01540.t01 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_05s0077g01550.t01 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_05s0077g01560.t01 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_05s0077g01570.t01 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_05s0077g01580.t01 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_05s0077g01600.t01 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_05s0077g01630.t01 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_05s0077g01650.t01 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_05s0077g01660.t01 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_05s0077g01690.t01 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_08s0007g00750.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_08s0105g00380.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_11s0016g03200.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_16s0039g01770.t01 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_16s0039g01790.t01 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
VIT_18s0001g01390.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_18s0001g03430.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_18s0001g03490.t01 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
VIT_00s0287g00010.t01 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
VIT_00s0309g00020.t01 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
VIT_00s0429g00030.t01 Alkaloid NMT medium pass NMT__00017__sp_F4K1J4_ATXR7_ARATH
VIT_01s0011g05200.t01 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
VIT_01s0011g05220.t01 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
VIT_01s0150g00070.t01 Alkaloid NMT medium pass NMT__00042__sp_Q8GZB6_SUVH4_ARATH
VIT_01s0182g00050.t01 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
VIT_02s0025g02930.t01 Alkaloid NMT medium pass NMT__00011__sp_A9X7L0_ANMT_RUTGR
VIT_02s0025g02940.t01 Alkaloid NMT medium pass NMT__00009__sp_A0AA51VIL7_NMT1_LOPWI
VIT_02s0154g00540.t01 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
VIT_03s0017g01120.t01 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
VIT_03s0038g02920.t01 Alkaloid NMT medium borderline NMT__00045__sp_Q8VYX1_PEAM1_WHEAT
VIT_04s0008g03120.t01 Alkaloid NMT medium pass NMT__00041__sp_Q8GWT4_ANM15_ARATH
VIT_04s0008g06180.t01 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
VIT_04s0023g00980.t01 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
VIT_04s0023g01760.t01 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
VIT_04s0023g02170.t01 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
VIT_04s0023g03560.t01 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
VIT_04s0023g03800.t01 Alkaloid NMT medium borderline NMT__00005__sp_A0A6C0WW36_CKTCS_CAMSB
VIT_04s0043g00790.t01 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
VIT_04s0044g00940.t01 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
VIT_04s0044g00950.t01 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH