Vitis vinifera (vitis_vinifera)
Imported from atlas release summary for Vitis vinifera.
2439
Candidate Protein Records
2428
Pathway-Level Records
5360
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
5360
Family-Level Calls
C4H
6.06%
C3'H/CYP98A
5.88%
UGT
4.65%
7DLGT
4.27%
UFGT
4.25%
CYP76
4.24%
BAHD
4.18%
IFS
3.9%
Other Families
62.57%
More Families (98)
T3O
174
3.25%
CAD
154
2.87%
POD
143
2.67%
F3H
141
2.63%
CAS
136
2.54%
DWF4/CYP90B1
136
2.54%
TPS
117
2.18%
GES
110
2.05%
F3'H/CYP75B
108
2.01%
LAC
105
1.96%
STR
102
1.9%
4CL
99
1.85%
CODM/T6ODM
96
1.79%
BR6OX2/CYP85A2
84
1.57%
PYKS
79
1.47%
NMT
77
1.44%
SMT1/SMT2/SMT3
64
1.19%
PAL
60
1.12%
IO
55
1.03%
TRI/TRII
55
1.03%
CHS
55
1.03%
COMT
51
0.95%
CYP71
50
0.93%
G8O/G8H
49
0.91%
ANR
49
0.91%
GS
48
0.9%
CYP90D1
47
0.88%
H6H
46
0.86%
16OMT
41
0.76%
IFR
38
0.71%
SGD
36
0.67%
7DLH
34
0.63%
T16H
34
0.63%
F3'5'H/CYP75A
33
0.62%
CSE
29
0.54%
HCT
29
0.54%
NCS
28
0.52%
SLS
28
0.52%
LAMT
28
0.52%
CCR
27
0.5%
CYP51G1
27
0.5%
CPD/CYP90A1
27
0.5%
COR
25
0.47%
TAT
24
0.45%
BBE
23
0.43%
RAS
23
0.43%
PMT
21
0.39%
FNS
21
0.39%
BR6OX1/CYP85A1
21
0.39%
DFR
19
0.35%
F5H/CYP84A
19
0.35%
8HGO
17
0.32%
CNMT
11
0.21%
CCoAOMT
10
0.19%
AACT
10
0.19%
MPO
9
0.17%
ROT3/CYP90C1
9
0.17%
DXS
9
0.17%
HMGS
9
0.17%
CYP80B1
8
0.15%
ANS/LDOX
8
0.15%
GGPPS
8
0.15%
ISY
7
0.13%
TYDC_DDC
7
0.13%
XMT_MXMT_DXMT
6
0.11%
CPR
6
0.11%
SQE
6
0.11%
CYP719
5
0.09%
HPPR
5
0.09%
SQS/FDFT1
5
0.09%
DET2
5
0.09%
FPPS
5
0.09%
ADC
4
0.07%
6OMT_4OMT_SOMT
4
0.07%
ODC
4
0.07%
DWF1
4
0.07%
DWF7
4
0.07%
HDR/IspH
4
0.07%
IDI
4
0.07%
MVK
4
0.07%
TDC
3
0.06%
CHI
3
0.06%
SMO1/SMO2
3
0.06%
HMGR
3
0.06%
MVD
3
0.06%
DWF5
2
0.04%
GPPS
2
0.04%
MCT/IspD
2
0.04%
MDS/IspF
2
0.04%
CYP80F1
1
0.02%
FLS
1
0.02%
HYD1
1
0.02%
FK
1
0.02%
CPI1
1
0.02%
PMK
1
0.02%
HDS/IspG
1
0.02%
CMK/IspE
1
0.02%
DXR
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 668 | 20 | UGT (240) | View species results |
| Alkaloid pathway | 580 | 21 | 7DLGT (116) | View species results |
| Phenylpropanoid pathway | 453 | 12 | POD (134) | View species results |
| Flavonoid pathway | 350 | 12 | UFGT (217) | View species results |
| Rosmarinic acid pathway | 195 | 7 | C4H (108) | View species results |
| Steroid pathway | 182 | 14 | CAS (117) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2025 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 276 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| VIT_06s0009g00530.t01 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_06s0009g00850.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_06s0009g03380.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_06s0061g00230.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_06s0061g00240.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_06s0061g00250.t01 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_06s0061g00260.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_06s0061g01470.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_06s0061g01480.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_06s0061g01490.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_06s0080g00040.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_07s0005g02330.t01 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_07s0031g02550.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_07s0191g00010.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_08s0007g03710.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_08s0007g05360.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_08s0007g05370.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_08s0007g08730.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_08s0032g00790.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_08s0040g01620.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_08s0040g02840.t01 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g03550.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g03560.t01 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g03580.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g03630.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g03640.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05360.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05370.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05380.t01 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05400.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05410.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05440.t01 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05490.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05510.t01 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05530.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05560.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05570.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05590.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g05600.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g06930.t01 | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_09s0002g06940.t01 | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| VIT_10s0042g00010.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_10s0042g00020.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_10s0042g00030.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_10s0042g00050.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_10s0071g00010.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_10s0071g00020.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_10s0071g00250.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_11s0016g00860.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| VIT_11s0016g00870.t01 | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |