PlantSME Plant secondary metabolism enzyme database

Warburgia ugandensis (warburgia_ugandensis)

Imported from atlas release summary for Warburgia ugandensis.

1833
Candidate Protein Records
1603
Pathway-Level Records
3964
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Current group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Basal angiosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 30.63% Phenylpropanoid pathway 22.89% Alkaloid pathway 20.96% Flavonoid pathway 9.86% Rosmarinic acid pathway 9.17% Steroid pathway 6.49%
Family Distribution
C4H 6.66% C3'H/CYP98A 6.58% BAHD 5.65% CYP76 4.54% IFS 4.39% POD 3.91% T3O 3.78% UGT 3.23%
Other Families 61.25%
More Families (98)
4CL 117 2.95% DWF4/CYP90B1 106 2.67% 7DLGT 97 2.45% UFGT 96 2.42% F3H 91 2.3% CAD 80 2.02% F3'H/CYP75B 79 1.99% NMT 73 1.84% TPS 72 1.82% GES 71 1.79% CAS 70 1.77% BR6OX2/CYP85A2 68 1.72% CODM/T6ODM 59 1.49% STR 58 1.46% CYP71 51 1.29% SMT1/SMT2/SMT3 48 1.21% HCT 44 1.11% TRI/TRII 43 1.08% COMT 42 1.06% LAC 41 1.03% IFR 37 0.93% CSE 36 0.91% RAS 36 0.91% G8O/G8H 35 0.88% PMT 35 0.88% CYP90D1 35 0.88% SGD 34 0.86% H6H 33 0.83% 16OMT 32 0.81% PYKS 32 0.81% IO 32 0.81% T16H 31 0.78% ANR 31 0.78% CCR 30 0.76% CYP51G1 28 0.71% GS 27 0.68% PAL 27 0.68% NCS 22 0.55% COR 21 0.53% 7DLH 20 0.5% F3'5'H/CYP75A 20 0.5% FNS 19 0.48% TAT 18 0.45% DFR 17 0.43% F5H/CYP84A 16 0.4% BR6OX1/CYP85A1 16 0.4% CYP719 15 0.38% LAMT 15 0.38% CPD/CYP90A1 14 0.35% SLS 13 0.33% 8HGO 12 0.3% CNMT 12 0.3% BBE 12 0.3% HMGR 11 0.28% ROT3/CYP90C1 10 0.25% FPPS 10 0.25% SQS/FDFT1 9 0.23% GGPPS 9 0.23% CYP80B1 8 0.2% TYDC_DDC 8 0.2% DXS 8 0.2% MPO 7 0.18% 6OMT_4OMT_SOMT 7 0.18% CHS 7 0.18% CHI 6 0.15% CCoAOMT 6 0.15% CPR 6 0.15% AACT 6 0.15% HDR/IspH 6 0.15% CYP80F1 5 0.13% ISY 5 0.13% ANS/LDOX 5 0.13% HPPR 5 0.13% DET2 5 0.13% SMO1/SMO2 5 0.13% MVD 5 0.13% CMK/IspE 5 0.13% FLS 4 0.1% TDC 3 0.08% ODC 3 0.08% ADC 3 0.08% SQE 3 0.08% DXR 3 0.08% IDI 3 0.08% CPI1 2 0.05% DWF1 2 0.05% DWF7 2 0.05% MCT/IspD 2 0.05% MVK 2 0.05% HDS/IspG 2 0.05% HMGS 2 0.05% MDS/IspF 2 0.05% PMK 2 0.05% XMT_MXMT_DXMT 1 0.03% FK 1 0.03% HYD1 1 0.03% DWF5 1 0.03% GPPS 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 491 20 BAHD (166) View species results
Phenylpropanoid pathway 367 11 POD (146) View species results
Alkaloid pathway 336 22 GES (66) View species results
Flavonoid pathway 158 10 UFGT (84) View species results
Rosmarinic acid pathway 147 7 C4H (67) View species results
Steroid pathway 104 11 CAS (56) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 304 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMK
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Protein/Isoform Record Pathway Family Confidence Status Best Target
warburgia_ugandensis_GWHPDQZE014474 Terpenoid PMK medium pass PMK__00001__sp_Q9C6T1_PMK_ARATH
warburgia_ugandensis_GWHPDQZE017392 Terpenoid PMK medium pass PMK__00001__sp_Q9C6T1_PMK_ARATH