PlantSME Plant secondary metabolism enzyme database

Welwitschia mirabilis (welwitschia_mirabilis)

Imported from atlas release summary for Welwitschia mirabilis.

1815
Candidate Protein Records
1458
Pathway-Level Records
3345
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Current group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Pathway Coverage
Terpenoid pathway 27.5% Phenylpropanoid pathway 27.09% Alkaloid pathway 22.5% Flavonoid pathway 11.93% Rosmarinic acid pathway 6.17% Steroid pathway 4.8%
Family Distribution
C4H 5.98% POD 5.02% C3'H/CYP98A 4.87% BAHD 4.87% CYP76 4.6% UGT 3.86% 4CL 3.32% 7DLGT 2.99%
Other Families 64.48%
More Families (97)
LAC 98 2.93% UFGT 87 2.6% IFS 86 2.57% F3H 85 2.54% SGD 78 2.33% NMT 71 2.12% F3'H/CYP75B 70 2.09% CODM/T6ODM 65 1.94% CAD 63 1.88% DWF4/CYP90B1 61 1.82% BR6OX2/CYP85A2 50 1.49% G8O/G8H 48 1.43% T3O 47 1.41% H6H 43 1.29% TPS 43 1.29% GS 42 1.26% BBE 39 1.17% SMT1/SMT2/SMT3 38 1.14% IO 36 1.08% IFR 35 1.05% ANR 35 1.05% HCT 35 1.05% T16H 34 1.02% PYKS 34 1.02% TRI/TRII 34 1.02% CHS 33 0.99% STR 32 0.96% GES 31 0.93% F3'5'H/CYP75A 31 0.93% CAS 31 0.93% FNS 30 0.9% COMT 30 0.9% RAS 30 0.9% 8HGO 28 0.84% PAL 27 0.81% CSE 23 0.69% CCR 23 0.69% HMGR 22 0.66% LAMT 21 0.63% CYP71 21 0.63% CYP719 20 0.6% CYP90D1 20 0.6% ODC 19 0.57% CNMT 18 0.54% 16OMT 18 0.54% CPD/CYP90A1 18 0.54% SLS 17 0.51% ANS/LDOX 15 0.45% CYP80B1 14 0.42% COR 13 0.39% DFR 11 0.33% AACT 11 0.33% NCS 10 0.3% F5H/CYP84A 10 0.3% ROT3/CYP90C1 10 0.3% PMT 9 0.27% FPPS 9 0.27% 7DLH 8 0.24% XMT_MXMT_DXMT 7 0.21% TAT 7 0.21% BR6OX1/CYP85A1 7 0.21% IDI 7 0.21% 6OMT_4OMT_SOMT 6 0.18% ISY 6 0.18% CPR 6 0.18% GGPPS 6 0.18% CYP80F1 5 0.15% ADC 5 0.15% CYP51G1 5 0.15% CCoAOMT 4 0.12% SMO1/SMO2 4 0.12% DET2 4 0.12% HYD1 4 0.12% DXR 4 0.12% MVD 4 0.12% HPPR 3 0.09% SQS/FDFT1 3 0.09% DWF5 3 0.09% MCT/IspD 3 0.09% HMGS 3 0.09% CMK/IspE 3 0.09% TYDC_DDC 2 0.06% MPO 2 0.06% TDC 2 0.06% CHI 2 0.06% CPI1 2 0.06% SQE 2 0.06% DWF1 2 0.06% FK 2 0.06% DWF7 2 0.06% PMK 2 0.06% HDR/IspH 2 0.06% MVK 2 0.06% FLS 1 0.03% MDS/IspF 1 0.03% HDS/IspG 1 0.03% DXS 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 401 19 BAHD (124) View species results
Phenylpropanoid pathway 395 13 POD (152) View species results
Alkaloid pathway 328 26 SGD (68) View species results
Flavonoid pathway 174 13 UFGT (65) View species results
Rosmarinic acid pathway 90 7 C4H (32) View species results
Steroid pathway 70 13 CAS (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1135 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 228 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Wmir17G0007290 Phenylpropanoid POD medium pass POD__00027__sp_Q9XIV8_PERN1_TOBAC
Wmir18G0000580 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Wmir18G0007100 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Wmir18G0007110 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Wmir18G0007120 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
Wmir18G0007450 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
Wmir18G0007490 Phenylpropanoid POD medium pass POD__00013__sp_Q4W1I8_PER1_ZINEL
Wmir19G0001890 Phenylpropanoid POD medium pass POD__00028__sp_Q9ZVD5_AGO4_ARATH
Wmir20G0001430 Phenylpropanoid POD low borderline POD__00007__sp_P0C5C9_REHYA_ORYSJ
Wmir20G0001520 Phenylpropanoid POD low borderline POD__00010__sp_P84516_PER1_SORBI
Wmir20G0001530 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
Wmir21G0005400 Phenylpropanoid POD medium pass POD__00023__sp_Q9M7T0_PRX2F_ARATH
Wmir21G0005470 Phenylpropanoid POD medium pass POD__00010__sp_P84516_PER1_SORBI
WmirUNG0000980 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
WmirUNG0000990 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
WmirUNG0006150 Phenylpropanoid POD medium pass POD__00001__sp_A5H452_PER70_MAIZE
WmirUNG0010220 Phenylpropanoid POD medium pass POD__00021__sp_Q9LEH3_PER15_IPOBA
WmirUNG0013720 Phenylpropanoid POD low borderline POD__00013__sp_Q4W1I8_PER1_ZINEL