PlantSME Plant secondary metabolism enzyme database

Wurfbainia villosa (wurfbainia_villosa)

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Imported from atlas release summary for Wurfbainia villosa.

1530
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 27.19% Alkaloid pathway 23.01% Phenylpropanoid pathway 22.61% Flavonoid pathway 12.22% Rosmarinic acid pathway 9.8% Steroid pathway 5.16%
Family Distribution
C4H 6.66% BAHD 6.47% C3'H/CYP98A 6.24% POD 4.87% IFS 4.53% T3O 4.05% 4CL 3.79% UGT 3.45%
Other Families 59.95%
More Families (94)
CYP76 127 3.34% 7DLGT 124 3.26% UFGT 121 3.18% TRI/TRII 103 2.71% BR6OX2/CYP85A2 96 2.53% DWF4/CYP90B1 89 2.34% NMT 88 2.32% F3'H/CYP75B 79 2.08% F3H 77 2.03% CYP71 76 2.0% STR 72 1.89% SMT1/SMT2/SMT3 65 1.71% CODM/T6ODM 52 1.37% PYKS 52 1.37% IFR 51 1.34% CSE 51 1.34% RAS 45 1.18% LAC 38 1.0% PMT 36 0.95% CYP90D1 34 0.89% T16H 33 0.87% CAD 33 0.87% HCT 32 0.84% GS 29 0.76% COMT 29 0.76% SGD 27 0.71% H6H 27 0.71% SLS 27 0.71% F5H/CYP84A 26 0.68% CYP51G1 26 0.68% G8O/G8H 25 0.66% CPR 22 0.58% ANR 21 0.55% 16OMT 20 0.53% 7DLH 20 0.53% CCR 17 0.45% 8HGO 16 0.42% CHS 16 0.42% CYP719 15 0.39% PAL 15 0.39% DXS 15 0.39% NCS 14 0.37% FNS 14 0.37% BR6OX1/CYP85A1 14 0.37% GGPPS 14 0.37% COR 13 0.34% CAS 13 0.34% F3'5'H/CYP75A 12 0.32% IO 11 0.29% AACT 11 0.29% TAT 10 0.26% CNMT 9 0.24% DFR 9 0.24% CPD/CYP90A1 9 0.24% LAMT 8 0.21% MPO 8 0.21% BBE 8 0.21% ISY 7 0.18% ANS/LDOX 7 0.18% DET2 7 0.18% SQS/FDFT1 7 0.18% FLS 5 0.13% HYD1 5 0.13% ROT3/CYP90C1 5 0.13% SMO1/SMO2 5 0.13% MVD 5 0.13% HDS/IspG 5 0.13% HDR/IspH 5 0.13% FPPS 5 0.13% HMGR 5 0.13% CYP80B1 4 0.11% CHI 4 0.11% HPPR 4 0.11% SQE 4 0.11% DXR 4 0.11% MVK 4 0.11% ADC 3 0.08% CCoAOMT 3 0.08% CPI1 3 0.08% MCT/IspD 3 0.08% IDI 3 0.08% 6OMT_4OMT_SOMT 2 0.05% TYDC_DDC 2 0.05% DWF5 2 0.05% DWF7 2 0.05% FK 2 0.05% DWF1 2 0.05% CMK/IspE 2 0.05% HMGS 2 0.05% MDS/IspF 2 0.05% TDC 1 0.03% CYP80F1 1 0.03% XMT_MXMT_DXMT 1 0.03% PMK 1 0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 416 19 BAHD (185) View species results
Alkaloid pathway 352 19 TRI/TRII (91) View species results
Phenylpropanoid pathway 346 13 POD (174) View species results
Flavonoid pathway 187 11 UFGT (111) View species results
Rosmarinic acid pathway 150 7 C4H (74) View species results
Steroid pathway 79 11 SMT1/SMT2/SMT3 (44) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1545 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 323 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
wurfbainia_villosa_Wv_040087.m1 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
wurfbainia_villosa_Wv_040088.m1 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
wurfbainia_villosa_Wv_042227.m1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
wurfbainia_villosa_Wv_053768.m1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
wurfbainia_villosa_Wv_065640.m1 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
wurfbainia_villosa_Wv_040087.m1 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
wurfbainia_villosa_Wv_040088.m1 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
wurfbainia_villosa_Wv_042227.m1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
wurfbainia_villosa_Wv_053768.m1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
wurfbainia_villosa_Wv_065640.m1 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
wurfbainia_villosa_Wv_040087.m1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
wurfbainia_villosa_Wv_040088.m1 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
wurfbainia_villosa_Wv_042227.m1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
wurfbainia_villosa_Wv_053768.m1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
wurfbainia_villosa_Wv_065640.m1 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR