PlantSME Plant secondary metabolism enzyme database

Xanthoceras sorbifolium (xanthoceras_sorbifolium)

Imported from atlas release summary for Xanthoceras sorbifolium.

1797
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.33% Alkaloid pathway 23.59% Phenylpropanoid pathway 17.64% Flavonoid pathway 13.91% Rosmarinic acid pathway 8.63% Steroid pathway 6.9%
Family Distribution
C4H 7.03% C3'H/CYP98A 6.37% IFS 4.31% BAHD 4.27% UGT 4.14% 7DLGT 4.02% UFGT 3.93% T3O 3.78%
Other Families 62.14%
More Families (96)
CYP76 170 3.61% DWF4/CYP90B1 145 3.08% 4CL 141 3.0% F3H 133 2.83% POD 127 2.7% CAD 107 2.27% F3'H/CYP75B 105 2.23% TPS 99 2.1% CAS 98 2.08% GES 96 2.04% CODM/T6ODM 90 1.91% CYP71 86 1.83% BR6OX2/CYP85A2 84 1.78% NMT 78 1.66% STR 65 1.38% G8O/G8H 45 0.96% TRI/TRII 44 0.93% CYP90D1 41 0.87% SMT1/SMT2/SMT3 41 0.87% IFR 40 0.85% SGD 39 0.83% H6H 39 0.83% HCT 39 0.83% LAC 38 0.81% F5H/CYP84A 38 0.81% CSE 36 0.76% 7DLH 35 0.74% GS 35 0.74% TAT 35 0.74% T16H 34 0.72% IO 34 0.72% BBE 33 0.7% COMT 32 0.68% CPD/CYP90A1 31 0.66% FNS 30 0.64% ANR 29 0.62% SLS 28 0.59% PYKS 26 0.55% F3'5'H/CYP75A 26 0.55% 16OMT 24 0.51% CYP51G1 24 0.51% NCS 23 0.49% RAS 23 0.49% GGPPS 20 0.42% CNMT 19 0.4% PMT 19 0.4% CCR 18 0.38% COR 17 0.36% LAMT 16 0.34% PAL 15 0.32% SQS/FDFT1 15 0.32% BR6OX1/CYP85A1 15 0.32% SQE 14 0.3% 8HGO 10 0.21% DFR 10 0.21% ROT3/CYP90C1 10 0.21% AACT 10 0.21% CYP719 9 0.19% MPO 9 0.19% TYDC_DDC 8 0.17% HPPR 8 0.17% FPPS 8 0.17% CYP80B1 7 0.15% DET2 7 0.15% ISY 6 0.13% ANS/LDOX 6 0.13% CHI 6 0.13% CHS 6 0.13% CCoAOMT 6 0.13% CPR 6 0.13% XMT_MXMT_DXMT 5 0.11% MVK 5 0.11% MCT/IspD 5 0.11% DXS 5 0.11% CMK/IspE 4 0.08% HMGR 4 0.08% ODC 3 0.06% MVD 3 0.06% HMGS 3 0.06% CYP80F1 2 0.04% SMO1/SMO2 2 0.04% PMK 2 0.04% IDI 2 0.04% HDS/IspG 2 0.04% 6OMT_4OMT_SOMT 1 0.02% ADC 1 0.02% FLS 1 0.02% DWF1 1 0.02% DWF5 1 0.02% CPI1 1 0.02% DWF7 1 0.02% FK 1 0.02% HYD1 1 0.02% HDR/IspH 1 0.02% DXR 1 0.02% MDS/IspF 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 527 19 UGT (177) View species results
Alkaloid pathway 424 22 GES (96) View species results
Phenylpropanoid pathway 317 11 POD (121) View species results
Flavonoid pathway 250 10 UFGT (173) View species results
Rosmarinic acid pathway 155 7 C4H (67) View species results
Steroid pathway 124 10 CAS (64) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1981 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 263 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HMGR
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Gene Pathway Family Confidence Status Best Target
Xsor02G0014550.1 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Xsor04G0016940.1 Terpenoid HMGR medium pass HMGR__00001__sp_A0A0A1C3I2_HMGR1_PANGI
Xsor10G0004120.1 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI
Xsorctg16310003030.1 Terpenoid HMGR medium pass HMGR__00002__sp_A0A0A1C930_HMR2A_PANGI