PlantSME Plant secondary metabolism enzyme database

Zanthoxylum bungeanum (zanthoxylum_bungeanum)

Imported from atlas release summary for Zanthoxylum bungeanum.

3893
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Site group 117
Eudicots
Current group 495
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.15% Phenylpropanoid pathway 22.12% Alkaloid pathway 20.63% Flavonoid pathway 11.74% Rosmarinic acid pathway 9.99% Steroid pathway 6.37%
Family Distribution
BAHD 6.14% C4H 5.74% C3'H/CYP98A 5.37% 4CL 3.96% CYP76 3.9% UGT 3.56% IFS 3.47% F3H 3.38%
Other Families 64.48%
More Families (98)
POD 307 3.38% 7DLGT 303 3.34% T3O 299 3.29% UFGT 292 3.22% NMT 256 2.82% CODM/T6ODM 201 2.21% DWF4/CYP90B1 176 1.94% STR 169 1.86% HCT 160 1.76% RAS 155 1.71% COMT 143 1.57% F3'H/CYP75B 141 1.55% BR6OX2/CYP85A2 138 1.52% CAD 128 1.41% H6H 123 1.35% CAS 112 1.23% PMT 109 1.2% CYP71 104 1.15% TRI/TRII 98 1.08% IFR 98 1.08% SMT1/SMT2/SMT3 93 1.02% LAC 92 1.01% PYKS 86 0.95% GS 83 0.91% CSE 77 0.85% CYP90D1 77 0.85% TPS 77 0.85% BBE 75 0.83% 16OMT 74 0.81% GES 71 0.78% G8O/G8H 69 0.76% TAT 62 0.68% T16H 61 0.67% FNS 61 0.67% SGD 60 0.66% CCR 53 0.58% NCS 50 0.55% ANR 46 0.51% 7DLH 45 0.5% F5H/CYP84A 45 0.5% F3'5'H/CYP75A 43 0.47% IO 40 0.44% BR6OX1/CYP85A1 40 0.44% LAMT 39 0.43% PAL 39 0.43% CPD/CYP90A1 39 0.43% DFR 36 0.4% CNMT 34 0.37% SLS 32 0.35% CYP51G1 31 0.34% 8HGO 30 0.33% ROT3/CYP90C1 30 0.33% GGPPS 30 0.33% ANS/LDOX 29 0.32% COR 28 0.31% CHS 25 0.28% CPR 25 0.28% SQE 23 0.25% CYP719 21 0.23% TYDC_DDC 20 0.22% AACT 20 0.22% FPPS 20 0.22% ISY 19 0.21% DWF7 18 0.2% DXS 18 0.2% SMO1/SMO2 17 0.19% SQS/FDFT1 17 0.19% MVD 17 0.19% MPO 16 0.18% CHI 15 0.17% CCoAOMT 15 0.17% MVK 13 0.14% ODC 12 0.13% HPPR 11 0.12% HMGR 11 0.12% HDS/IspG 10 0.11% DET2 9 0.1% XMT_MXMT_DXMT 8 0.09% HMGS 8 0.09% CPI1 7 0.08% DXR 7 0.08% CYP80B1 6 0.07% CMK/IspE 6 0.07% TDC 5 0.06% DWF1 5 0.06% IDI 5 0.06% MCT/IspD 5 0.06% MDS/IspF 5 0.06% 6OMT_4OMT_SOMT 4 0.04% FK 4 0.04% HDR/IspH 4 0.04% ADC 3 0.03% FLS 3 0.03% DWF5 3 0.03% HYD1 2 0.02% PMK 2 0.02% CYP80F1 1 0.01% GPPS 1 0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1135 21 BAHD (480) View species results
Phenylpropanoid pathway 861 11 POD (292) View species results
Alkaloid pathway 803 23 7DLGT (163) View species results
Flavonoid pathway 457 13 UFGT (274) View species results
Rosmarinic acid pathway 389 7 C4H (109) View species results
Steroid pathway 248 12 CAS (101) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3116 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 873 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
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Gene Pathway Family Confidence Status
zanthoxylum_bungeanum_ZbB_C01.Contig98.20 Steroid DWF7 low borderline
zanthoxylum_bungeanum_ZbB_C09.Contig1107.22 Steroid DWF7 low borderline
zanthoxylum_bungeanum_ZbB_C14.Contig219.649 Steroid DWF7 low borderline
zanthoxylum_bungeanum_ZbB_C16.Contig17a.11 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbB_C17.Contig1261.3 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbB_C19.Contig3.3.232 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbB_C19.Contig3.4.85 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbB_C24.Contig241.182 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbB_C24.Contig448.11 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbB_C25.Contig190.121 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbB_C30.Contig385.2 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbC_C01.Contig166.22 Steroid DWF7 low borderline
zanthoxylum_bungeanum_ZbC_C11.Contig246.211 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbC_C11.Contig571.14 Steroid DWF7 low borderline
zanthoxylum_bungeanum_ZbC_C14.Contig19.356 Steroid DWF7 low borderline
zanthoxylum_bungeanum_ZbC_C16.Contig296.88 Steroid DWF7 medium pass
zanthoxylum_bungeanum_ZbC_C27.Contig418.94 Steroid DWF7 medium pass
zanthoxylum_bungeanum_Zb_Contig31.Contig956.75 Steroid DWF7 low borderline