Ziziphus jujuba (ziziphus_jujuba)
Imported from atlas release summary for Ziziphus jujuba.
2544
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2544
Candidate Genes
BAHD
6.47%
UGT
5.74%
C4H
5.66%
7DLGT
5.54%
UFGT
5.4%
C3'H/CYP98A
5.4%
IFS
3.88%
T3O
3.25%
Other Families
58.66%
More Families (96)
CYP76
189
3.2%
POD
188
3.18%
4CL
174
2.95%
F3H
150
2.54%
NMT
119
2.02%
DWF4/CYP90B1
115
1.95%
CAD
114
1.93%
F3'H/CYP75B
93
1.57%
STR
91
1.54%
BR6OX2/CYP85A2
91
1.54%
CODM/T6ODM
90
1.52%
SMT1/SMT2/SMT3
85
1.44%
CAS
82
1.39%
H6H
74
1.25%
HCT
74
1.25%
RAS
70
1.19%
TRI/TRII
67
1.13%
IFR
66
1.12%
COMT
61
1.03%
CYP90D1
61
1.03%
CYP71
59
1.0%
GS
55
0.93%
LAMT
54
0.91%
ANR
54
0.91%
PYKS
52
0.88%
TAT
49
0.83%
TPS
49
0.83%
PMT
48
0.81%
LAC
48
0.81%
16OMT
47
0.8%
SGD
46
0.78%
GES
45
0.76%
T16H
43
0.73%
IO
42
0.71%
NCS
40
0.68%
CCR
35
0.59%
7DLH
33
0.56%
SLS
31
0.52%
CSE
31
0.52%
BBE
30
0.51%
8HGO
25
0.42%
DFR
25
0.42%
COR
24
0.41%
CYP51G1
24
0.41%
G8O/G8H
22
0.37%
F3'5'H/CYP75A
21
0.36%
BR6OX1/CYP85A1
21
0.36%
F5H/CYP84A
19
0.32%
CPD/CYP90A1
19
0.32%
CCoAOMT
18
0.3%
FNS
16
0.27%
ROT3/CYP90C1
16
0.27%
PAL
15
0.25%
AACT
15
0.25%
CNMT
13
0.22%
HPPR
13
0.22%
ANS/LDOX
12
0.2%
CHS
12
0.2%
MVK
12
0.2%
TYDC_DDC
11
0.19%
GGPPS
11
0.19%
MPO
10
0.17%
DXS
10
0.17%
CPR
9
0.15%
SQE
9
0.15%
ISY
8
0.14%
MCT/IspD
8
0.14%
CHI
7
0.12%
DET2
7
0.12%
FPPS
7
0.12%
6OMT_4OMT_SOMT
6
0.1%
CYP80B1
6
0.1%
SQS/FDFT1
6
0.1%
CMK/IspE
6
0.1%
CYP719
5
0.08%
HMGR
5
0.08%
XMT_MXMT_DXMT
4
0.07%
SMO1/SMO2
4
0.07%
HYD1
4
0.07%
HMGS
4
0.07%
MVD
4
0.07%
FLS
3
0.05%
IDI
3
0.05%
TDC
2
0.03%
CYP80F1
2
0.03%
CPI1
2
0.03%
DWF5
2
0.03%
FK
2
0.03%
PMK
2
0.03%
MDS/IspF
2
0.03%
ODC
1
0.02%
ADC
1
0.02%
DWF1
1
0.02%
HDS/IspG
1
0.02%
DXR
1
0.02%
HDR/IspH
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 799 | 20 | UGT (325) | View species results |
| Alkaloid pathway | 527 | 22 | 7DLGT (142) | View species results |
| Phenylpropanoid pathway | 426 | 11 | POD (181) | View species results |
| Flavonoid pathway | 404 | 12 | UFGT (307) | View species results |
| Rosmarinic acid pathway | 223 | 7 | C4H (93) | View species results |
| Steroid pathway | 165 | 12 | CAS (76) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1986 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 526 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: STR
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| XP_015893533.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015893534.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015893537.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015893538.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015893554.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015895507.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00002__sp_P68175_STSY_RAUSE |
| XP_015895542.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015895564.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_015895571.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_015895572.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_015895759.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898029.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898065.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898067.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898068.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898102.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898176.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898189.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898190.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898198.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015898385.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015899161.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015900056.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015900154.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015900453.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015900595.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_015900613.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |
| XP_015901179.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015901954.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902376.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902393.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902394.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902406.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902422.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902423.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902470.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902471.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902721.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902754.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902755.1[Ziziphus | Alkaloid | STR | low | borderline | STR__00001__sp_D3GE74_STR1_MEDTR |
| XP_015902997.1[Ziziphus | Alkaloid | STR | medium | pass | STR__00003__sp_Q9M1B4_SSL13_ARATH |