PlantSME Plant secondary metabolism enzyme database

Zoysia japonica (zoysia_japonica)

Imported from atlas release summary for Zoysia japonica.

1463
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.67% Phenylpropanoid pathway 21.12% Alkaloid pathway 20.57% Rosmarinic acid pathway 12.17% Flavonoid pathway 11.21% Steroid pathway 5.26%
Family Distribution
C4H 6.76% BAHD 6.48% C3'H/CYP98A 5.94% 4CL 4.38% POD 3.86% CYP76 3.74% UGT 3.71% IFS 3.51%
Other Families 61.62%
More Families (97)
T3O 128 3.17% DWF4/CYP90B1 111 2.75% F3'H/CYP75B 108 2.67% F3H 100 2.47% BR6OX2/CYP85A2 87 2.15% 7DLGT 76 1.88% CYP71 70 1.73% UFGT 63 1.56% RAS 58 1.44% NMT 56 1.39% STR 56 1.39% G8O/G8H 55 1.36% HCT 53 1.31% PMT 52 1.29% H6H 51 1.26% CAD 51 1.26% CCR 49 1.21% SMT1/SMT2/SMT3 49 1.21% PAL 48 1.19% LAC 47 1.16% SLS 46 1.14% CODM/T6ODM 45 1.11% T16H 41 1.01% ANR 41 1.01% TPS 41 1.01% SGD 39 0.97% IFR 38 0.94% CAS 38 0.94% TRI/TRII 37 0.92% FNS 36 0.89% CPD/CYP90A1 35 0.87% CYP90D1 34 0.84% NCS 33 0.82% GS 30 0.74% F5H/CYP84A 30 0.74% DFR 28 0.69% COMT 27 0.67% GES 26 0.64% 16OMT 25 0.62% F3'5'H/CYP75A 25 0.62% IO 23 0.57% COR 22 0.54% CSE 21 0.52% PYKS 19 0.47% 8HGO 19 0.47% CHS 19 0.47% CYP51G1 19 0.47% 7DLH 17 0.42% BR6OX1/CYP85A1 16 0.4% FPPS 16 0.4% BBE 14 0.35% TYDC_DDC 11 0.27% ANS/LDOX 10 0.25% TAT 10 0.25% MVK 10 0.25% CPR 9 0.22% SQS/FDFT1 9 0.22% SMO1/SMO2 8 0.2% GGPPS 8 0.2% HMGR 8 0.2% CYP80B1 7 0.17% CNMT 7 0.17% CCoAOMT 7 0.17% AACT 7 0.17% HPPR 6 0.15% MPO 5 0.12% XMT_MXMT_DXMT 5 0.12% CYP719 5 0.12% 6OMT_4OMT_SOMT 5 0.12% ISY 5 0.12% CHI 5 0.12% DET2 5 0.12% LAMT 4 0.1% TDC 4 0.1% CYP80F1 4 0.1% FLS 4 0.1% ROT3/CYP90C1 4 0.1% PMK 4 0.1% HMGS 4 0.1% DXS 4 0.1% ADC 3 0.07% ODC 3 0.07% DWF1 3 0.07% DWF5 3 0.07% MDS/IspF 3 0.07% IDI 3 0.07% MVD 3 0.07% GPPS 3 0.07% SQE 2 0.05% FK 2 0.05% CPI1 2 0.05% DXR 2 0.05% MCT/IspD 2 0.05% HYD1 1 0.02% DWF7 1 0.02% CMK/IspE 1 0.02% HDR/IspH 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 434 20 BAHD (180) View species results
Phenylpropanoid pathway 309 12 POD (120) View species results
Alkaloid pathway 301 22 PMT (34) View species results
Rosmarinic acid pathway 178 7 C4H (71) View species results
Flavonoid pathway 164 12 UFGT (47) View species results
Steroid pathway 77 14 CAS (26) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1671 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 373 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status
ZjapZjn_sc00001.10005870 Terpenoid FPPS medium borderline
ZjapZjn_sc00003.10037350 Terpenoid FPPS low borderline
ZjapZjn_sc00004.10060740 Terpenoid FPPS low borderline
ZjapZjn_sc00005.10064370 Terpenoid FPPS low borderline
ZjapZjn_sc00008.10105050 Terpenoid FPPS medium borderline
ZjapZjn_sc00009.10113310 Terpenoid FPPS medium pass
ZjapZjn_sc00009.10113320 Terpenoid FPPS medium pass
ZjapZjn_sc00011.10126730 Terpenoid FPPS low borderline
ZjapZjn_sc00012.10137880 Terpenoid FPPS low borderline
ZjapZjn_sc00012.10137890 Terpenoid FPPS medium pass
ZjapZjn_sc00023.10230780 Terpenoid FPPS medium pass
ZjapZjn_sc00027.10249850 Terpenoid FPPS medium pass
ZjapZjn_sc00029.10262420 Terpenoid FPPS medium pass
ZjapZjn_sc00137.10508320 Terpenoid FPPS medium pass
ZjapZjn_sc00849.10554920 Terpenoid FPPS medium pass
ZjapZjn_sc00849.10554930 Terpenoid FPPS medium pass