PlantSME Plant secondary metabolism enzyme database

Zoysia pacifica (zoysia_pacifica)

Imported from atlas release summary for Zoysia pacifica.

1722
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Algae
Site group 29
Bryophytes
Site group 125
Lycophytes/Ferns
Site group 4
Gymnosperms
Site group 6
Basal angiosperms
Site group 13
Monocots
Current group 117
Eudicots
Site group 495
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
Terpenoid pathway 29.67% Phenylpropanoid pathway 20.67% Alkaloid pathway 19.86% Rosmarinic acid pathway 12.43% Flavonoid pathway 11.96% Steroid pathway 5.4%
Family Distribution
BAHD 6.54% C4H 6.36% C3'H/CYP98A 6.14% CYP76 3.96% UGT 3.86% 4CL 3.75% POD 3.69% IFS 3.53%
Other Families 62.17%
More Families (98)
T3O 153 3.09% DWF4/CYP90B1 133 2.68% F3'H/CYP75B 125 2.52% F3H 124 2.5% BR6OX2/CYP85A2 114 2.3% 7DLGT 107 2.16% UFGT 86 1.74% CYP71 86 1.74% NMT 85 1.72% H6H 72 1.45% G8O/G8H 70 1.41% STR 69 1.39% RAS 68 1.37% PMT 66 1.33% HCT 63 1.27% SLS 61 1.23% CCR 60 1.21% CODM/T6ODM 59 1.19% SMT1/SMT2/SMT3 59 1.19% LAC 57 1.15% CAS 57 1.15% T16H 54 1.09% PAL 54 1.09% IFR 52 1.05% TRI/TRII 49 0.99% ANR 46 0.93% CAD 46 0.93% TPS 41 0.83% SGD 39 0.79% F5H/CYP84A 39 0.79% CYP90D1 39 0.79% NCS 38 0.77% FNS 38 0.77% F3'5'H/CYP75A 34 0.69% COR 33 0.67% DFR 33 0.67% CPD/CYP90A1 33 0.67% GS 31 0.63% 7DLH 31 0.63% IO 30 0.61% GES 28 0.57% COMT 28 0.57% 16OMT 26 0.52% CHS 26 0.52% BR6OX1/CYP85A1 26 0.52% 8HGO 24 0.48% PYKS 23 0.46% CSE 23 0.46% CYP51G1 23 0.46% ANS/LDOX 22 0.44% TAT 15 0.3% FPPS 15 0.3% TYDC_DDC 13 0.26% AACT 13 0.26% HMGR 12 0.24% TDC 11 0.22% HPPR 11 0.22% CPR 11 0.22% MPO 10 0.2% SMO1/SMO2 10 0.2% DXS 10 0.2% CYP80B1 9 0.18% SQS/FDFT1 9 0.18% MVK 9 0.18% IDI 9 0.18% CNMT 8 0.16% LAMT 8 0.16% 6OMT_4OMT_SOMT 7 0.14% GGPPS 7 0.14% ISY 6 0.12% CCoAOMT 6 0.12% ROT3/CYP90C1 6 0.12% HMGS 6 0.12% CYP80F1 5 0.1% CHI 5 0.1% FLS 5 0.1% DET2 5 0.1% MVD 5 0.1% CYP719 4 0.08% XMT_MXMT_DXMT 4 0.08% FK 4 0.08% PMK 4 0.08% DXR 4 0.08% ODC 3 0.06% ADC 3 0.06% BBE 3 0.06% MCT/IspD 3 0.06% SQE 2 0.04% DWF7 2 0.04% HYD1 2 0.04% DWF1 2 0.04% CPI1 2 0.04% CMK/IspE 2 0.04% MDS/IspF 2 0.04% HDR/IspH 2 0.04% DWF5 1 0.02% GPPS 1 0.02% HDS/IspG 1 0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 511 21 BAHD (208) View species results
Phenylpropanoid pathway 356 12 POD (133) View species results
Alkaloid pathway 342 24 PMT (45) View species results
Rosmarinic acid pathway 214 7 C4H (89) View species results
Flavonoid pathway 206 14 UFGT (73) View species results
Steroid pathway 93 15 CAS (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2065 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 455 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status Best Target
ZPZ_r1.0_Zpz_sc00006.1.g00140.1.sm.mk Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
ZPZ_r1.0_Zpz_sc00094.1.g00140.1.am.mk Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
ZPZ_r1.0_Zpz_sc00094.1.g00150.1.am.mk Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
ZPZ_r1.0_Zpz_sc00168.1.g00040.1.am.mk Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
ZPZ_r1.0_Zpz_sc00302.1.g00420.1.sm.mk Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH
ZPZ_r1.0_Zpz_sc00735.1.g00190.1.am.mk Steroid ROT3/CYP90C1 medium borderline ROT3_CYP90C1__00001__sp_Q9M066_C90C1_ARATH