PlantSME Plant secondary metabolism enzyme database
4CL

4CL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family 4CL.

Lineage Coverage
Detected in 774 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 25907 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 25910 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 25914 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
acer_truncatum_Atru.chr13.164 acer_truncatum acer_truncatum_Atru.chr13.164
acer_truncatum_Atru.chr13.455 acer_truncatum acer_truncatum_Atru.chr13.455
acer_truncatum_Atru.chr2.1024 acer_truncatum acer_truncatum_Atru.chr2.1024
acer_truncatum_Atru.chr2.1047 acer_truncatum acer_truncatum_Atru.chr2.1047
acer_truncatum_Atru.chr2.400.1 acer_truncatum acer_truncatum_Atru.chr2.400.1
acer_truncatum_Atru.chr2.401 acer_truncatum acer_truncatum_Atru.chr2.401
acer_truncatum_Atru.chr3.3542 acer_truncatum acer_truncatum_Atru.chr3.3542
acer_truncatum_Atru.chr3.3543 acer_truncatum acer_truncatum_Atru.chr3.3543
acer_truncatum_Atru.chr3.948 acer_truncatum acer_truncatum_Atru.chr3.948
acer_truncatum_Atru.chr3.952 acer_truncatum acer_truncatum_Atru.chr3.952
acer_truncatum_Atru.chr3.953 acer_truncatum acer_truncatum_Atru.chr3.953
acer_truncatum_Atru.chr3.955 acer_truncatum acer_truncatum_Atru.chr3.955
acer_truncatum_Atru.chr4.1549 acer_truncatum acer_truncatum_Atru.chr4.1549
acer_truncatum_Atru.chr4.2506 acer_truncatum acer_truncatum_Atru.chr4.2506
acer_truncatum_Atru.chr4.2974 acer_truncatum acer_truncatum_Atru.chr4.2974
acer_truncatum_Atru.chr4.2975 acer_truncatum acer_truncatum_Atru.chr4.2975
acer_truncatum_Atru.chr5.2516 acer_truncatum acer_truncatum_Atru.chr5.2516
acer_truncatum_Atru.chr5.2906 acer_truncatum acer_truncatum_Atru.chr5.2906
acer_truncatum_Atru.chr5.947 acer_truncatum acer_truncatum_Atru.chr5.947
acer_truncatum_Atru.chr6.1563 acer_truncatum acer_truncatum_Atru.chr6.1563
acer_truncatum_Atru.chr6.1564 acer_truncatum acer_truncatum_Atru.chr6.1564
acer_truncatum_Atru.chr6.2509 acer_truncatum acer_truncatum_Atru.chr6.2509
acer_truncatum_Atru.chr6.2510 acer_truncatum acer_truncatum_Atru.chr6.2510
acer_truncatum_Atru.chr6.2744 acer_truncatum acer_truncatum_Atru.chr6.2744
acer_truncatum_Atru.chr6.3029 acer_truncatum acer_truncatum_Atru.chr6.3029
acer_truncatum_Atru.chr6.3423 acer_truncatum acer_truncatum_Atru.chr6.3423
acer_truncatum_Atru.chr6.774 acer_truncatum acer_truncatum_Atru.chr6.774
acer_truncatum_Atru.chr6.803 acer_truncatum acer_truncatum_Atru.chr6.803
acer_truncatum_Atru.chr7.672 acer_truncatum acer_truncatum_Atru.chr7.672
acer_truncatum_Atru.chr9.1036 acer_truncatum acer_truncatum_Atru.chr9.1036