PlantSME Plant secondary metabolism enzyme database
4CL

4CL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family 4CL.

Lineage Coverage
Detected in 774 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 25907 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 25910 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 25914 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
AcruScioBoG_3008_HRSCAF_30150182400.2 amaranthus_cruentus AcruScioBoG_3008_HRSCAF_30150182400.2
AcruScioBoG_3703_HRSCAF_37190188500.2 amaranthus_cruentus AcruScioBoG_3703_HRSCAF_37190188500.2
AcruScioBoG_3703_HRSCAF_37190188510.1 amaranthus_cruentus AcruScioBoG_3703_HRSCAF_37190188510.1
AcruScioBoG_3703_HRSCAF_37190189190.1 amaranthus_cruentus AcruScioBoG_3703_HRSCAF_37190189190.1
AcruScioBoG_3895_HRSCAF_39120199060.1 amaranthus_cruentus AcruScioBoG_3895_HRSCAF_39120199060.1
AcruScioBoG_3895_HRSCAF_39120199060.4 amaranthus_cruentus AcruScioBoG_3895_HRSCAF_39120199060.4
AcruScioBoG_4088_HRSCAF_41070202250.1 amaranthus_cruentus AcruScioBoG_4088_HRSCAF_41070202250.1
AcruScioBoG_4088_HRSCAF_41070203730.1 amaranthus_cruentus AcruScioBoG_4088_HRSCAF_41070203730.1
AcruScioBoG_4119_HRSCAF_41380209120.1 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380209120.1
AcruScioBoG_4119_HRSCAF_41380209940.1 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380209940.1
AcruScioBoG_4119_HRSCAF_41380209940.2 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380209940.2
AcruScioBoG_4119_HRSCAF_41380209940.3 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380209940.3
AcruScioBoG_4119_HRSCAF_41380212280.1 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380212280.1
AcruScioBoG_4119_HRSCAF_41380212280.2 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380212280.2
AcruScioBoG_4119_HRSCAF_41380212560.1 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380212560.1
AcruScioBoG_4119_HRSCAF_41380212580.1 amaranthus_cruentus AcruScioBoG_4119_HRSCAF_41380212580.1
AcruScioBoG_8578_HRSCAF_86170223780.1 amaranthus_cruentus AcruScioBoG_8578_HRSCAF_86170223780.1
AcruScioBoG_8578_HRSCAF_86170224550.1 amaranthus_cruentus AcruScioBoG_8578_HRSCAF_86170224550.1
AcruScioBoG_94932_HRSCAF_951340230850.1 amaranthus_cruentus AcruScioBoG_94932_HRSCAF_951340230850.1
AcruScioBoG_94932_HRSCAF_951340230850.2 amaranthus_cruentus AcruScioBoG_94932_HRSCAF_951340230850.2
AcruScioBoG_94932_HRSCAF_951340230850.3 amaranthus_cruentus AcruScioBoG_94932_HRSCAF_951340230850.3
AMhypContig177|quiver|0000440.1 amaranthus_hypochondriacus AMhypContig177|quiver|0000440.1
AMhypContig177|quiver|0000840.1 amaranthus_hypochondriacus AMhypContig177|quiver|0000840.1
AMhypContig177|quiver|0000850.1 amaranthus_hypochondriacus AMhypContig177|quiver|0000850.1
AMhypScaffold_10003240.1 amaranthus_hypochondriacus AMhypScaffold_10003240.1
AMhypScaffold_10020680.1 amaranthus_hypochondriacus AMhypScaffold_10020680.1
AMhypScaffold_10023170.1 amaranthus_hypochondriacus AMhypScaffold_10023170.1
AMhypScaffold_110045650.1 amaranthus_hypochondriacus AMhypScaffold_110045650.1
AMhypScaffold_110048390.1 amaranthus_hypochondriacus AMhypScaffold_110048390.1
AMhypScaffold_110050590.1 amaranthus_hypochondriacus AMhypScaffold_110050590.1