PlantSME

Lineage Coverage

Detected in 375 of 789 public species; click a lineage to inspect its species list.

Algae

Bryophytes

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Steroid pathway 888 current-family members Du et al. 2022; Zebosi et al. 2024

Sterol precursor formation

SQS/FDFT1 4389 SQE 4569 CAS 35857

Phytosterol backbone

SMT1/SMT2/SMT3 27781 SMO1/SMO2 4067 CPI1 1261 CYP51G1 190 FK 1234 HYD1 1364 DWF7 1524 DWF5 888 DWF1 1689

Brassinosteroid branch

DET2 1316 DWF4/CYP90B1 290 CPD/CYP90A1 103 ROT3/CYP90C1 193 CYP90D1 142 BR6OX1/CYP85A1 40 BR6OX2/CYP85A2 68

Family Gene List

Gene	Species	Protein ID
MAKER_10611-RA	amaranthus_palmeri	MAKER_10611-RA
MAKER_10612-RA	amaranthus_palmeri	MAKER_10612-RA
MAKER_10632-RA	amaranthus_palmeri	MAKER_10632-RA
MAKER_15824-RA	amaranthus_palmeri	MAKER_15824-RA
MAKER_18837-RA	amaranthus_palmeri	MAKER_18837-RA
MAKER_20414-RA	amaranthus_palmeri	MAKER_20414-RA
MAKER_23149-RA	amaranthus_palmeri	MAKER_23149-RA
MAKER_24954-RA	amaranthus_palmeri	MAKER_24954-RA
MAKER_24955-RA	amaranthus_palmeri	MAKER_24955-RA
MAKER_26678-RA	amaranthus_palmeri	MAKER_26678-RA
MAKER_26778-RA	amaranthus_palmeri	MAKER_26778-RA
MAKER_27287-RA	amaranthus_palmeri	MAKER_27287-RA
MAKER_27868-RA	amaranthus_palmeri	MAKER_27868-RA
MAKER_28101-RA	amaranthus_palmeri	MAKER_28101-RA
MAKER_28254-RA	amaranthus_palmeri	MAKER_28254-RA
MAKER_29828-RA	amaranthus_palmeri	MAKER_29828-RA
MAKER_32948-RA	amaranthus_palmeri	MAKER_32948-RA
amaranthus_tricolor_g12096.t1	amaranthus_tricolor	amaranthus_tricolor_g12096.t1
amaranthus_tricolor_g14563.t1	amaranthus_tricolor	amaranthus_tricolor_g14563.t1
amaranthus_tricolor_g15227.t1	amaranthus_tricolor	amaranthus_tricolor_g15227.t1
amaranthus_tricolor_g15736.t1	amaranthus_tricolor	amaranthus_tricolor_g15736.t1
amaranthus_tricolor_g1585.t1	amaranthus_tricolor	amaranthus_tricolor_g1585.t1
amaranthus_tricolor_g16927.t1	amaranthus_tricolor	amaranthus_tricolor_g16927.t1
amaranthus_tricolor_g18686.t1	amaranthus_tricolor	amaranthus_tricolor_g18686.t1
amaranthus_tricolor_g18840.t1	amaranthus_tricolor	amaranthus_tricolor_g18840.t1
amaranthus_tricolor_g20718.t1	amaranthus_tricolor	amaranthus_tricolor_g20718.t1
amaranthus_tricolor_g21504.t1	amaranthus_tricolor	amaranthus_tricolor_g21504.t1
amaranthus_tricolor_g21715.t1	amaranthus_tricolor	amaranthus_tricolor_g21715.t1
amaranthus_tricolor_g21717.t1	amaranthus_tricolor	amaranthus_tricolor_g21717.t1
amaranthus_tricolor_g21719.t1	amaranthus_tricolor	amaranthus_tricolor_g21719.t1