HCT

Atlas summary family HCT.

Lineage Coverage

Detected in 755 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Phenylpropanoid pathway

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Phenylpropanoid pathway 14877 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013

Entry backbone

PAL 7015 C4H/CYP73A 432 4CL 25910

Hydroxycinnamoyl and monolignol backbone

HCT 14877 C3'H/CYP98A 10198 CSE 29610 CCoAOMT 6839 CCR 4440

S/G branch and monolignol formation

F5H/CYP84A 306 COMT 22394 CAD 17134

Oxidative polymerization

LAC 28156 POD 122923

Family Gene List

Gene	Species	Protein ID
AMhypScaffold_30134600.1	amaranthus_hypochondriacus	AMhypScaffold_30134600.1
AMhypScaffold_30149480.1	amaranthus_hypochondriacus	AMhypScaffold_30149480.1
AMhypScaffold_30149490.1	amaranthus_hypochondriacus	AMhypScaffold_30149490.1
AMhypScaffold_30149500.1	amaranthus_hypochondriacus	AMhypScaffold_30149500.1
AMhypScaffold_40151290.1	amaranthus_hypochondriacus	AMhypScaffold_40151290.1
AMhypScaffold_40151300.1	amaranthus_hypochondriacus	AMhypScaffold_40151300.1
AMhypScaffold_40151310.1	amaranthus_hypochondriacus	AMhypScaffold_40151310.1
AMhypScaffold_40151480.1	amaranthus_hypochondriacus	AMhypScaffold_40151480.1
AMhypScaffold_40151490.1	amaranthus_hypochondriacus	AMhypScaffold_40151490.1
AMhypScaffold_40152600.1	amaranthus_hypochondriacus	AMhypScaffold_40152600.1
AMhypScaffold_40155710.1	amaranthus_hypochondriacus	AMhypScaffold_40155710.1
AMhypScaffold_50172820.1	amaranthus_hypochondriacus	AMhypScaffold_50172820.1
AMhypScaffold_60183940.1	amaranthus_hypochondriacus	AMhypScaffold_60183940.1
AMhypScaffold_60183960.1	amaranthus_hypochondriacus	AMhypScaffold_60183960.1
AMhypScaffold_60184790.1	amaranthus_hypochondriacus	AMhypScaffold_60184790.1
AMhypScaffold_60189380.1	amaranthus_hypochondriacus	AMhypScaffold_60189380.1
AMhypScaffold_60196740.1	amaranthus_hypochondriacus	AMhypScaffold_60196740.1
AMhypScaffold_80213600.1	amaranthus_hypochondriacus	AMhypScaffold_80213600.1
AMhypScaffold_90226940.1	amaranthus_hypochondriacus	AMhypScaffold_90226940.1
AMhypScaffold_90228910.1	amaranthus_hypochondriacus	AMhypScaffold_90228910.1
AMhypScaffold_90233550.1	amaranthus_hypochondriacus	AMhypScaffold_90233550.1
AMhypScaffold_90234630.1	amaranthus_hypochondriacus	AMhypScaffold_90234630.1
MAKER_00323-RA	amaranthus_palmeri	MAKER_00323-RA
MAKER_00496-RA	amaranthus_palmeri	MAKER_00496-RA
MAKER_01427-RA	amaranthus_palmeri	MAKER_01427-RA
MAKER_03841-RA	amaranthus_palmeri	MAKER_03841-RA
MAKER_03852-RA	amaranthus_palmeri	MAKER_03852-RA
MAKER_03853-RA	amaranthus_palmeri	MAKER_03853-RA
MAKER_03855-RA	amaranthus_palmeri	MAKER_03855-RA
MAKER_03856-RA	amaranthus_palmeri	MAKER_03856-RA