PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
Pambctg010740_pilon_pilon_pilon0163970 pallavicinia_ambigua Pambctg010740_pilon_pilon_pilon0163970
Pambctg011450_pilon_pilon_pilon0174200 pallavicinia_ambigua Pambctg011450_pilon_pilon_pilon0174200
Pambctg011840_pilon_pilon_pilon0179940 pallavicinia_ambigua Pambctg011840_pilon_pilon_pilon0179940
Pambctg011990_pilon_pilon_pilon0181870 pallavicinia_ambigua Pambctg011990_pilon_pilon_pilon0181870
Pambctg012880_pilon_pilon_pilon0195830 pallavicinia_ambigua Pambctg012880_pilon_pilon_pilon0195830
Pambctg012920_pilon_pilon_pilon0196760 pallavicinia_ambigua Pambctg012920_pilon_pilon_pilon0196760
Pambctg012940_pilon_pilon_pilon0197070 pallavicinia_ambigua Pambctg012940_pilon_pilon_pilon0197070
Pambctg013180_pilon_pilon_pilon0200210 pallavicinia_ambigua Pambctg013180_pilon_pilon_pilon0200210
Pambctg013220_pilon_pilon_pilon0200700 pallavicinia_ambigua Pambctg013220_pilon_pilon_pilon0200700
Pambctg014150_pilon_pilon_pilon0225640 pallavicinia_ambigua Pambctg014150_pilon_pilon_pilon0225640
Pambctg014340_pilon_pilon_pilon0227830 pallavicinia_ambigua Pambctg014340_pilon_pilon_pilon0227830
Pambctg015010_pilon_pilon_pilon0236490 pallavicinia_ambigua Pambctg015010_pilon_pilon_pilon0236490
Pambctg015090_pilon_pilon_pilon0238130 pallavicinia_ambigua Pambctg015090_pilon_pilon_pilon0238130
Pambctg015370_pilon_pilon_pilon0245780 pallavicinia_ambigua Pambctg015370_pilon_pilon_pilon0245780
Pambctg015700_pilon_pilon_pilon0254730 pallavicinia_ambigua Pambctg015700_pilon_pilon_pilon0254730
Pambctg016040_pilon_pilon_pilon0269910 pallavicinia_ambigua Pambctg016040_pilon_pilon_pilon0269910
Pg_S0012.4 panax_ginseng Pg_S0012.4
Pg_S0121.33 panax_ginseng Pg_S0121.33
Pg_S0121.37 panax_ginseng Pg_S0121.37
Pg_S0244.45 panax_ginseng Pg_S0244.45
Pg_S0252.8 panax_ginseng Pg_S0252.8
Pg_S0266.78 panax_ginseng Pg_S0266.78
Pg_S0266.79 panax_ginseng Pg_S0266.79
Pg_S0669.2 panax_ginseng Pg_S0669.2
Pg_S0710.17 panax_ginseng Pg_S0710.17
Pg_S0908.14 panax_ginseng Pg_S0908.14
Pg_S1087.3 panax_ginseng Pg_S1087.3
Pg_S1212.28 panax_ginseng Pg_S1212.28
Pg_S1231.10 panax_ginseng Pg_S1231.10
Pg_S1231.9 panax_ginseng Pg_S1231.9