PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pg_S0077.7 Alkaloid 16OMT medium borderline
Pg_S0077.9 Alkaloid 16OMT medium borderline
Pg_S0219.8 Alkaloid 16OMT medium borderline
Pg_S0258.6 Alkaloid 16OMT low borderline
Pg_S1242.32 Alkaloid 16OMT medium borderline
Pg_S1446.7 Alkaloid 16OMT medium borderline
Pg_S1446.8 Alkaloid 16OMT medium borderline
Pg_S2245.39 Alkaloid 16OMT medium borderline
Pg_S2327.6 Alkaloid 16OMT medium borderline
Pg_S2438.5 Alkaloid 16OMT medium borderline
Pg_S2552.2 Alkaloid 16OMT medium borderline
Pg_S3328.5 Alkaloid 16OMT medium borderline
Pg_S4189.1 Alkaloid 16OMT medium borderline
Pg_S4251.2 Alkaloid 16OMT medium borderline
Pg_S4267.1 Alkaloid 16OMT medium borderline
Pg_S4531.4 Alkaloid 16OMT medium borderline
Pg_S5312.2 Alkaloid 16OMT medium borderline
Pg_S5312.8 Alkaloid 16OMT medium borderline
Pg_S5713.7 Alkaloid 16OMT medium borderline
Pg_S5719.2 Alkaloid 16OMT medium borderline
Pg_S5719.3 Alkaloid 16OMT medium borderline
Pg_S5926.9 Alkaloid 16OMT medium borderline
Pg_S8134.2 Alkaloid 16OMT medium borderline
Pg_S8510.3 Alkaloid 16OMT medium borderline
Pg_S0905.27 Alkaloid 6OMT_4OMT_SOMT medium borderline
Pg_S0014.6 Alkaloid 7DLGT low borderline
Pg_S0064.10 Alkaloid 7DLGT low borderline
Pg_S0069.7 Alkaloid 7DLGT medium pass
Pg_S0077.12 Alkaloid 7DLGT low borderline
Pg_S0189.32 Alkaloid 7DLGT medium pass
Pg_S0189.33 Alkaloid 7DLGT low borderline
Pg_S0211.1 Alkaloid 7DLGT low borderline
Pg_S0245.36 Alkaloid 7DLGT low borderline
Pg_S0247.24 Alkaloid 7DLGT low borderline
Pg_S0288.2 Alkaloid 7DLGT medium pass
Pg_S0288.4 Alkaloid 7DLGT high pass
Pg_S0288.5 Alkaloid 7DLGT high pass
Pg_S0302.10 Alkaloid 7DLGT medium pass
Pg_S0302.19 Alkaloid 7DLGT low borderline
Pg_S0302.4 Alkaloid 7DLGT high pass
Pg_S0302.5 Alkaloid 7DLGT high pass
Pg_S0302.8 Alkaloid 7DLGT low borderline
Pg_S0350.28 Alkaloid 7DLGT medium pass
Pg_S0450.17 Alkaloid 7DLGT low borderline
Pg_S0450.18 Alkaloid 7DLGT low borderline
Pg_S0450.20 Alkaloid 7DLGT low borderline
Pg_S0490.11 Alkaloid 7DLGT medium pass
Pg_S0490.12 Alkaloid 7DLGT medium pass
Pg_S0500.29 Alkaloid 7DLGT high pass
Pg_S0542.10 Alkaloid 7DLGT medium pass