PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SQE
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Gene Pathway Family Confidence Status Best Target
Pg_S0129.28 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S0341.4 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
Pg_S0967.30 Steroid SQE medium pass SQE__00005__sp_Q9SM02_ERG14_ARATH
Pg_S1672.1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S1693.31 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S2606.7 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
Pg_S2606.8 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S2840.6 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S3064.5 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S3064.7 Steroid SQE medium pass SQE__00005__sp_Q9SM02_ERG14_ARATH
Pg_S3767.14 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
Pg_S3767.15 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S4043.1 Steroid SQE low borderline SQE__00001__sp_B7TWW5_SQE2_PANGI
Pg_S4043.9 Steroid SQE medium pass SQE__00001__sp_B7TWW5_SQE2_PANGI
Pg_S4249.3 Steroid SQE low borderline SQE__00001__sp_B7TWW5_SQE2_PANGI
Pg_S4651.2 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S4651.3 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S6081.2 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S6152.1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S6308.10 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S7552.1 Steroid SQE medium pass SQE__00002__sp_O48651_SQE1_PANGI
Pg_S7552.2 Steroid SQE low borderline SQE__00005__sp_Q9SM02_ERG14_ARATH