PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
Reset
Gene Pathway Family Confidence Status Best Target
Pg_S0015.12 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pg_S0534.55 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pg_S0930.10 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pg_S0992.39 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pg_S1155.4 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Pg_S1453.6 Flavonoid CHS medium pass CHS__00006__sp_P30074_CHS2_MEDSA
Pg_S1701.8 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Pg_S2045.2 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pg_S2813.6 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Pg_S2813.7 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
Pg_S2813.8 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
Pg_S2902.11 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pg_S3366.3 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pg_S5470.1 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
Pg_S6041.4 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA