PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
Pg_S0168.4 Alkaloid 8HGO low borderline
Pg_S0170.9 Alkaloid 8HGO low borderline
Pg_S0402.10 Alkaloid 8HGO medium borderline
Pg_S0402.9 Alkaloid 8HGO medium borderline
Pg_S0408.51 Alkaloid 8HGO low borderline
Pg_S0476.8 Alkaloid 8HGO medium borderline
Pg_S0476.9 Alkaloid 8HGO medium borderline
Pg_S0688.7 Alkaloid 8HGO medium borderline
Pg_S0753.13 Alkaloid 8HGO medium borderline
Pg_S0769.10 Alkaloid 8HGO low borderline
Pg_S0871.14 Alkaloid 8HGO low borderline
Pg_S0996.5 Alkaloid 8HGO low borderline
Pg_S1079.2 Alkaloid 8HGO low borderline
Pg_S1185.31 Alkaloid 8HGO medium borderline
Pg_S1373.25 Alkaloid 8HGO low borderline
Pg_S1663.1 Alkaloid 8HGO low borderline
Pg_S1862.20 Alkaloid 8HGO medium pass
Pg_S2144.3 Alkaloid 8HGO medium borderline
Pg_S2533.8 Alkaloid 8HGO medium pass
Pg_S2707.4 Alkaloid 8HGO low borderline
Pg_S2707.6 Alkaloid 8HGO medium pass
Pg_S2871.24 Alkaloid 8HGO low borderline
Pg_S3733.3 Alkaloid 8HGO low borderline
Pg_S3777.12 Alkaloid 8HGO medium borderline
Pg_S4149.29 Alkaloid 8HGO low borderline
Pg_S5440.1 Alkaloid 8HGO medium borderline
Pg_S5763.5 Alkaloid 8HGO medium borderline