PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANS/LDOX
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Gene Pathway Family Confidence Status Best Target
Pg_S0859.25 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Pg_S0949.2 Flavonoid ANS/LDOX low borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
Pg_S1311.22 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00003__sp_O04274_LDOX_PERFR
Pg_S1881.5 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Pg_S2641.17 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Pg_S2950.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00005__sp_Q96323_LDOX_ARATH
Pg_S3825.5 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00004__sp_O80449_JOX4_ARATH
Pg_S3958.3 Flavonoid ANS/LDOX medium pass ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Pg_S4379.6 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Pg_S5389.16 Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Pg_S5707.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Pg_S6292.1 Flavonoid ANS/LDOX low borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Pg_S7006.1 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00001__sp_A0A2R6PI27_LDOX_ACTCC
Pg_S7278.4 Flavonoid ANS/LDOX medium borderline ANS_LDOX__00003__sp_O04274_LDOX_PERFR