PlantSME Plant secondary metabolism enzyme database

Panax ginseng (panax_ginseng)

Imported from atlas release summary for Panax ginseng.

2784
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 874 20 BAHD (314) View species results
Alkaloid pathway 578 21 7DLGT (117) View species results
Phenylpropanoid pathway 553 13 POD (226) View species results
Flavonoid pathway 343 12 UFGT (219) View species results
Rosmarinic acid pathway 254 7 C4H (95) View species results
Steroid pathway 182 12 CAS (87) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 2508 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 556 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Pg_S0542.11 Alkaloid 7DLGT medium pass
Pg_S0684.30 Alkaloid 7DLGT low borderline
Pg_S0703.6 Alkaloid 7DLGT low borderline
Pg_S0743.11 Alkaloid 7DLGT medium pass
Pg_S0804.16 Alkaloid 7DLGT low borderline
Pg_S0804.18 Alkaloid 7DLGT medium pass
Pg_S0808.19 Alkaloid 7DLGT medium pass
Pg_S0808.3 Alkaloid 7DLGT low borderline
Pg_S0812.32 Alkaloid 7DLGT medium pass
Pg_S0812.35 Alkaloid 7DLGT low borderline
Pg_S0812.36 Alkaloid 7DLGT low borderline
Pg_S0859.6 Alkaloid 7DLGT medium pass
Pg_S0897.41 Alkaloid 7DLGT medium pass
Pg_S0915.6 Alkaloid 7DLGT high pass
Pg_S0997.12 Alkaloid 7DLGT medium pass
Pg_S0997.14 Alkaloid 7DLGT low borderline
Pg_S1027.2 Alkaloid 7DLGT low borderline
Pg_S1104.17 Alkaloid 7DLGT low borderline
Pg_S1106.49 Alkaloid 7DLGT medium pass
Pg_S1106.7 Alkaloid 7DLGT high pass
Pg_S1106.8 Alkaloid 7DLGT medium pass
Pg_S1116.15 Alkaloid 7DLGT medium pass
Pg_S1158.4 Alkaloid 7DLGT medium pass
Pg_S1171.33 Alkaloid 7DLGT low borderline
Pg_S1171.34 Alkaloid 7DLGT low borderline
Pg_S1183.1 Alkaloid 7DLGT medium pass
Pg_S1214.24 Alkaloid 7DLGT medium pass
Pg_S1240.45 Alkaloid 7DLGT medium pass
Pg_S1242.12 Alkaloid 7DLGT medium pass
Pg_S1242.28 Alkaloid 7DLGT low borderline
Pg_S1270.19 Alkaloid 7DLGT medium pass
Pg_S1273.4 Alkaloid 7DLGT low borderline
Pg_S1305.11 Alkaloid 7DLGT low borderline
Pg_S1305.12 Alkaloid 7DLGT low borderline
Pg_S1305.32 Alkaloid 7DLGT low borderline
Pg_S1305.8 Alkaloid 7DLGT medium pass
Pg_S1305.9 Alkaloid 7DLGT medium pass
Pg_S1312.7 Alkaloid 7DLGT low borderline
Pg_S1314.5 Alkaloid 7DLGT low borderline
Pg_S1358.28 Alkaloid 7DLGT low borderline
Pg_S1382.3 Alkaloid 7DLGT low borderline
Pg_S1389.36 Alkaloid 7DLGT medium pass
Pg_S1410.4 Alkaloid 7DLGT medium pass
Pg_S1425.14 Alkaloid 7DLGT low borderline
Pg_S1444.4 Alkaloid 7DLGT low borderline
Pg_S1468.16 Alkaloid 7DLGT low borderline
Pg_S1528.21 Alkaloid 7DLGT low borderline
Pg_S1567.3 Alkaloid 7DLGT low borderline
Pg_S1574.5 Alkaloid 7DLGT low borderline
Pg_S1647.36 Alkaloid 7DLGT low borderline