IO

Atlas summary family IO.

Lineage Coverage

Detected in 557 of 789 public species; click a lineage to inspect its species list.

Algae

Species Distribution

Related Modules

Pathway Position Map

Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.

Curated order

Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008

BIA benzylisoquinoline entry

TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109

BIA downstream branches

CYP719 57 COR 12777 CODM/T6ODM 213

MIA terpenoid and indole precursors

GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33

MIA post-strictosidine branches

STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796

Nicotine, tropane, and purine branches

ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70

Family Gene List

Gene	Species	Protein ID
citrus_australis_GWHPBQDX009000	citrus_australis	citrus_australis_GWHPBQDX009000
citrus_australis_GWHPBQDX028808	citrus_australis	citrus_australis_GWHPBQDX028808
Cclescaffold_50153700.1	citrus_clementina	Cclescaffold_50153700.1
Cclescaffold_70181840.1	citrus_clementina	Cclescaffold_70181840.1
CIgra01G0004910.1	citrus_grandis	CIgra01G0004910.1
CIgra01G0004910.2	citrus_grandis	CIgra01G0004910.2
CIgra03G0008120.1	citrus_grandis	CIgra03G0008120.1
Cichscaffold_10530008480.1	citrus_ichangensis	Cichscaffold_10530008480.1
Cichscaffold_20092180.1	citrus_ichangensis	Cichscaffold_20092180.1
Cichscaffold_440209970.1	citrus_ichangensis	Cichscaffold_440209970.1
Cichscaffold_4970226920.1	citrus_ichangensis	Cichscaffold_4970226920.1
Cichscaffold_65020265760.1	citrus_ichangensis	Cichscaffold_65020265760.1
citrus_limon_GWHPCBFQ000227.1	citrus_limon	citrus_limon_GWHPCBFQ000227.1
citrus_limon_GWHPCBFQ003256.1	citrus_limon	citrus_limon_GWHPCBFQ003256.1
citrus_limon_GWHPCBFQ016897.1	citrus_limon	citrus_limon_GWHPCBFQ016897.1
citrus_limon_GWHPCBFQ035328.1	citrus_limon	citrus_limon_GWHPCBFQ035328.1
citrus_limon_GWHPCBFQ061196.1	citrus_limon	citrus_limon_GWHPCBFQ061196.1
Cmedscaffold_1120017350.1	citrus_medica	Cmedscaffold_1120017350.1
Cmedscaffold_120025400.1	citrus_medica	Cmedscaffold_120025400.1
Cmedscaffold_120025400.3	citrus_medica	Cmedscaffold_120025400.3
Cmedscaffold_120025400.4	citrus_medica	Cmedscaffold_120025400.4
Cretscaffold30340_cov450059030.1	citrus_reticulata	Cretscaffold30340_cov450059030.1
Cretscaffold85925_cov910187740.1	citrus_reticulata	Cretscaffold85925_cov910187740.1
Cretscaffold86048_cov930258040.1	citrus_reticulata	Cretscaffold86048_cov930258040.1
Csinscaffold000170066060.1	citrus_sinensis	Csinscaffold000170066060.1
CsonA1G0033560.1	cleistogenes_songorica	CsonA1G0033560.1
CsonA2G0026690.1	cleistogenes_songorica	CsonA2G0026690.1
CsonA5G0008200.1	cleistogenes_songorica	CsonA5G0008200.1
CsonA9G0006100.1	cleistogenes_songorica	CsonA9G0006100.1
CsonB1G0029610.1	cleistogenes_songorica	CsonB1G0029610.1