PlantSME Plant secondary metabolism enzyme database
IO

IO

Atlas summary family IO.

Lineage Coverage
Detected in 557 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Triticum aestivum
Triticum turgidum
Papaver setigerum
Lonicera japonica
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1721 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
gossypium_rotundifolium_Grot_02G019800.1 gossypium_rotundifolium gossypium_rotundifolium_Grot_02G019800.1
gossypium_rotundifolium_Grot_04G006330.1 gossypium_rotundifolium gossypium_rotundifolium_Grot_04G006330.1
gossypium_rotundifolium_Grot_11G019390.1 gossypium_rotundifolium gossypium_rotundifolium_Grot_11G019390.1
gossypium_rotundifolium_Grot_Contig00884_ERROPOS400000+G000140.1 gossypium_rotundifolium gossypium_rotundifolium_Grot_Contig00884_ERROPOS400000+G000140.1
gossypium_stocksii_Gsto_01G005690.1 gossypium_stocksii gossypium_stocksii_Gsto_01G005690.1
gossypium_stocksii_Gsto_01G005700.1 gossypium_stocksii gossypium_stocksii_Gsto_01G005700.1
gossypium_stocksii_Gsto_02G001110.1 gossypium_stocksii gossypium_stocksii_Gsto_02G001110.1
gossypium_stocksii_Gsto_02G019520.1 gossypium_stocksii gossypium_stocksii_Gsto_02G019520.1
gossypium_stocksii_Gsto_04G016640.1 gossypium_stocksii gossypium_stocksii_Gsto_04G016640.1
gossypium_stocksii_Gsto_05G031710.1 gossypium_stocksii gossypium_stocksii_Gsto_05G031710.1
gossypium_stocksii_Gsto_11G019890.1 gossypium_stocksii gossypium_stocksii_Gsto_11G019890.1
gossypium_sturtianum_Gstu02G002330 gossypium_sturtianum gossypium_sturtianum_Gstu02G002330
gossypium_sturtianum_Gstu04G017660 gossypium_sturtianum gossypium_sturtianum_Gstu04G017660
gossypium_sturtianum_Gstu07G019750 gossypium_sturtianum gossypium_sturtianum_Gstu07G019750
GtomA02G0020300.1 gossypium_tomentosum GtomA02G0020300.1
GtomA02G0020300.2 gossypium_tomentosum GtomA02G0020300.2
GtomA03G0002530.1 gossypium_tomentosum GtomA03G0002530.1
GtomA05G0014480.2 gossypium_tomentosum GtomA05G0014480.2
GtomA05G0040040.1 gossypium_tomentosum GtomA05G0040040.1
GtomA11G0020380.1 gossypium_tomentosum GtomA11G0020380.1
GtomD01G0006000.1 gossypium_tomentosum GtomD01G0006000.1
GtomD03G0001210.1 gossypium_tomentosum GtomD03G0001210.1
GtomD04G0007010.1 gossypium_tomentosum GtomD04G0007010.1
GtomD04G0007010.2 gossypium_tomentosum GtomD04G0007010.2
GtomD11G0020630.1 gossypium_tomentosum GtomD11G0020630.1
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.01g315430.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.01g315430.m01.polypeptide
Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g048050.m01.polypeptide gossypium_turneri Gossypium-turneri-TURN-v1.0.a2-publish_TURN.02g048050.m01.polypeptide
GobtHiC_scaffold_10005610 grimmia_obtusifolia GobtHiC_scaffold_10005610
gynandropsis_gynandra_Gyn_10X_HIC_v5_00011897.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00011897.mRNA1
gynandropsis_gynandra_Gyn_10X_HIC_v5_00020638.mRNA1 gynandropsis_gynandra gynandropsis_gynandra_Gyn_10X_HIC_v5_00020638.mRNA1