PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
GtomA01G0022450.1 Alkaloid 16OMT medium borderline
GtomA03G0018890.1 Alkaloid 16OMT medium borderline
GtomA03G0018900.1 Alkaloid 16OMT medium borderline
GtomA03G0018910.1 Alkaloid 16OMT medium borderline
GtomA03G0018910.2 Alkaloid 16OMT medium borderline
GtomA04G0016680.1 Alkaloid 16OMT medium borderline
GtomA04G0016690.1 Alkaloid 16OMT medium borderline
GtomA04G0016700.1 Alkaloid 16OMT medium borderline
GtomA04G0016710.1 Alkaloid 16OMT medium borderline
GtomA04G0016720.1 Alkaloid 16OMT medium borderline
GtomA04G0016730.1 Alkaloid 16OMT medium borderline
GtomA05G0007580.1 Alkaloid 16OMT medium borderline
GtomA05G0021960.1 Alkaloid 16OMT low borderline
GtomA06G0002300.1 Alkaloid 16OMT low borderline
GtomA06G0015930.1 Alkaloid 16OMT medium borderline
GtomA07G0018780.1 Alkaloid 16OMT medium borderline
GtomA07G0018790.1 Alkaloid 16OMT medium borderline
GtomA08G0013140.1 Alkaloid 16OMT medium borderline
GtomA08G0025570.1 Alkaloid 16OMT medium borderline
GtomA09G0013550.1 Alkaloid 16OMT medium borderline
GtomA10G0011950.1 Alkaloid 16OMT medium borderline
GtomA10G0022910.1 Alkaloid 16OMT medium borderline
GtomA10G0022920.1 Alkaloid 16OMT medium borderline
GtomA10G0022920.2 Alkaloid 16OMT medium borderline
GtomA10G0022930.1 Alkaloid 16OMT medium borderline
GtomA10G0022930.2 Alkaloid 16OMT medium borderline
GtomA10G0022930.3 Alkaloid 16OMT medium borderline
GtomA10G0022930.4 Alkaloid 16OMT medium borderline
GtomA10G0023770.1 Alkaloid 16OMT medium borderline
GtomA10G0023800.1 Alkaloid 16OMT medium borderline
GtomA10G0023810.1 Alkaloid 16OMT medium borderline
GtomA12G0003710.1 Alkaloid 16OMT medium borderline
GtomA12G0003720.1 Alkaloid 16OMT medium borderline
GtomA12G0027530.1 Alkaloid 16OMT medium borderline
GtomA12G0027540.1 Alkaloid 16OMT medium borderline
GtomA12G0028010.1 Alkaloid 16OMT medium borderline
GtomA12G0028010.2 Alkaloid 16OMT medium borderline
GtomA13G0019600.1 Alkaloid 16OMT medium borderline
GtomA13G0021370.1 Alkaloid 16OMT low borderline
GtomD01G0023380.1 Alkaloid 16OMT medium borderline
GtomD02G0022790.1 Alkaloid 16OMT medium borderline
GtomD02G0022800.1 Alkaloid 16OMT medium borderline
GtomD02G0022830.1 Alkaloid 16OMT medium borderline
GtomD04G0020620.1 Alkaloid 16OMT medium borderline
GtomD04G0020630.1 Alkaloid 16OMT medium borderline
GtomD04G0020640.1 Alkaloid 16OMT medium borderline
GtomD04G0020650.1 Alkaloid 16OMT medium borderline
GtomD04G0020670.1 Alkaloid 16OMT medium borderline
GtomD05G0007770.1 Alkaloid 16OMT medium borderline
GtomD05G0022300.1 Alkaloid 16OMT low borderline