PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
GtomA01G0010530.1 Alkaloid IO medium borderline
GtomA01G0023130.1 Alkaloid IO medium borderline
GtomA02G0007860.1 Alkaloid IO medium borderline
GtomA02G0007860.2 Alkaloid IO medium borderline
GtomA02G0011940.1 Alkaloid IO medium borderline
GtomA02G0016420.1 Alkaloid IO medium borderline
GtomA03G0002540.2 Alkaloid IO low borderline
GtomA04G0009690.1 Alkaloid IO medium borderline
GtomA04G0009710.1 Alkaloid IO medium borderline
GtomA05G0004540.1 Alkaloid IO medium borderline
GtomA05G0004540.2 Alkaloid IO medium borderline
GtomA05G0007370.1 Alkaloid IO medium borderline
GtomA05G0011790.1 Alkaloid IO medium pass
GtomA05G0021440.1 Alkaloid IO medium borderline
GtomA05G0028580.1 Alkaloid IO low borderline
GtomA06G0000910.2 Alkaloid IO medium pass
GtomA06G0001640.1 Alkaloid IO medium borderline
GtomA06G0013120.1 Alkaloid IO medium borderline
GtomA07G0009260.3 Alkaloid IO low borderline
GtomA07G0018390.1 Alkaloid IO medium borderline
GtomA08G0014770.1 Alkaloid IO medium borderline
GtomA09G0022960.1 Alkaloid IO medium borderline
GtomA10G0006240.1 Alkaloid IO medium borderline
GtomA11G0020890.1 Alkaloid IO low borderline
GtomA11G0020890.2 Alkaloid IO low borderline
GtomA11G0038840.1 Alkaloid IO medium borderline
GtomA12G0003110.1 Alkaloid IO low borderline
GtomA12G0003120.1 Alkaloid IO low borderline
GtomA12G0030030.1 Alkaloid IO medium borderline
GtomA12G0030050.1 Alkaloid IO medium borderline
GtomA12G0030060.1 Alkaloid IO medium borderline
GtomA13G0014580.1 Alkaloid IO medium borderline
GtomD01G0024000.1 Alkaloid IO medium borderline
GtomD02G0011920.1 Alkaloid IO low borderline
GtomD03G0010780.1 Alkaloid IO medium borderline
GtomD04G0013190.1 Alkaloid IO medium borderline
GtomD05G0004680.1 Alkaloid IO medium borderline
GtomD05G0007540.1 Alkaloid IO medium borderline
GtomD05G0011930.1 Alkaloid IO medium pass
GtomD05G0021770.1 Alkaloid IO medium borderline
GtomD05G0021840.1 Alkaloid IO medium borderline
GtomD05G0028930.1 Alkaloid IO low borderline
GtomD05G0042770.1 Alkaloid IO medium borderline
GtomD06G0001030.1 Alkaloid IO medium pass
GtomD06G0001030.3 Alkaloid IO medium pass
GtomD06G0001690.1 Alkaloid IO low borderline
GtomD06G0001710.1 Alkaloid IO low borderline
GtomD06G0001770.1 Alkaloid IO high pass
GtomD06G0001800.1 Alkaloid IO medium borderline
GtomD06G0001830.1 Alkaloid IO medium borderline