PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status Best Target
GtomA01G0010090.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA03G0023210.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA05G0020790.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA07G0008730.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA10G0021290.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA10G0021330.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA10G0021350.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA10G0021370.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA11G0019700.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA12G0006900.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA12G0006910.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA13G0002980.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA13G0002990.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomA13G0025630.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD01G0009370.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD01G0009370.2 Alkaloid LAMT medium pass LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD02G0027090.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD02G0027090.2 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD05G0021110.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD10G0022480.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD10G0022480.2 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD10G0022480.3 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD10G0022490.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD10G0022540.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD10G0022560.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD11G0019870.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD12G0007070.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD12G0007080.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD13G0002950.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
GtomD13G0002960.1 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO