PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
GtomA03G0002080.1 Steroid CPD/CYP90A1 low borderline
GtomA04G0009690.1 Steroid CPD/CYP90A1 medium borderline
GtomA05G0038140.1 Steroid CPD/CYP90A1 low borderline
GtomA05G0044660.1 Steroid CPD/CYP90A1 low borderline
GtomA06G0001540.1 Steroid CPD/CYP90A1 low borderline
GtomA06G0001620.1 Steroid CPD/CYP90A1 low borderline
GtomA06G0001640.1 Steroid CPD/CYP90A1 low borderline
GtomA06G0001650.1 Steroid CPD/CYP90A1 low borderline
GtomA06G0023000.1 Steroid CPD/CYP90A1 low borderline
GtomA07G0003520.1 Steroid CPD/CYP90A1 low borderline
GtomA07G0018390.1 Steroid CPD/CYP90A1 low borderline
GtomA09G0022320.1 Steroid CPD/CYP90A1 medium borderline
GtomA09G0022340.1 Steroid CPD/CYP90A1 medium borderline
GtomA09G0022350.1 Steroid CPD/CYP90A1 medium borderline
GtomA09G0022360.1 Steroid CPD/CYP90A1 medium borderline
GtomA10G0023370.1 Steroid CPD/CYP90A1 low borderline
GtomA11G0001000.1 Steroid CPD/CYP90A1 medium borderline
GtomA11G0004460.1 Steroid CPD/CYP90A1 low borderline
GtomA11G0022500.1 Steroid CPD/CYP90A1 low borderline
GtomA11G0024910.1 Steroid CPD/CYP90A1 low borderline
GtomA11G0038920.1 Steroid CPD/CYP90A1 medium borderline
GtomA12G0002650.1 Steroid CPD/CYP90A1 low borderline
GtomA12G0006880.1 Steroid CPD/CYP90A1 medium borderline
GtomA12G0023460.1 Steroid CPD/CYP90A1 medium borderline
GtomD02G0003600.1 Steroid CPD/CYP90A1 low borderline
GtomD02G0003600.2 Steroid CPD/CYP90A1 low borderline
GtomD02G0003600.3 Steroid CPD/CYP90A1 low borderline
GtomD02G0003600.4 Steroid CPD/CYP90A1 low borderline
GtomD02G0003600.5 Steroid CPD/CYP90A1 low borderline
GtomD02G0003600.6 Steroid CPD/CYP90A1 low borderline
GtomD03G0019180.1 Steroid CPD/CYP90A1 low borderline
GtomD04G0009190.1 Steroid CPD/CYP90A1 low borderline
GtomD05G0021840.1 Steroid CPD/CYP90A1 low borderline
GtomD06G0001780.1 Steroid CPD/CYP90A1 low borderline
GtomD06G0001790.1 Steroid CPD/CYP90A1 low borderline
GtomD06G0001830.1 Steroid CPD/CYP90A1 low borderline
GtomD06G0001840.1 Steroid CPD/CYP90A1 low borderline
GtomD06G0025380.1 Steroid CPD/CYP90A1 low borderline
GtomD07G0006090.1 Steroid CPD/CYP90A1 medium borderline
GtomD07G0009200.2 Steroid CPD/CYP90A1 low borderline
GtomD07G0018820.1 Steroid CPD/CYP90A1 low borderline
GtomD08G0001490.1 Steroid CPD/CYP90A1 low borderline
GtomD10G0012270.1 Steroid CPD/CYP90A1 low borderline
GtomD10G0024700.1 Steroid CPD/CYP90A1 low borderline
GtomD10G0029730.1 Steroid CPD/CYP90A1 medium borderline
GtomD11G0000790.1 Steroid CPD/CYP90A1 medium borderline
GtomD11G0004250.1 Steroid CPD/CYP90A1 low borderline
GtomD11G0015920.1 Steroid CPD/CYP90A1 low borderline
GtomD11G0025820.1 Steroid CPD/CYP90A1 low borderline
GtomD11G0040740.1 Steroid CPD/CYP90A1 medium borderline