PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F5H/CYP84A
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Gene Pathway Family Confidence Status
GtomA01G0010560.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA01G0011180.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA01G0013830.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA01G0019380.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA01G0023140.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA02G0006530.1 Phenylpropanoid F5H/CYP84A low borderline
GtomA02G0006530.2 Phenylpropanoid F5H/CYP84A low borderline
GtomA03G0009700.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA03G0009710.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA03G0018330.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA03G0018330.2 Phenylpropanoid F5H/CYP84A medium borderline
GtomA03G0018330.3 Phenylpropanoid F5H/CYP84A medium borderline
GtomA04G0002480.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA04G0002520.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA04G0017280.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA04G0017290.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA05G0021460.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA05G0021480.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA07G0006560.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA07G0010760.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA07G0022410.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA08G0012670.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA08G0014770.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA08G0020640.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA08G0020650.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA10G0021450.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA10G0023860.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA11G0001010.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA11G0011300.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA11G0021340.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA12G0013310.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA12G0016120.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA12G0016120.2 Phenylpropanoid F5H/CYP84A medium borderline
GtomA12G0027350.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA13G0011910.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomA13G0014840.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD01G0007070.1 Phenylpropanoid F5H/CYP84A low borderline
GtomD01G0009790.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD02G0022150.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD04G0021300.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD04G0021310.3 Phenylpropanoid F5H/CYP84A medium borderline
GtomD07G0010810.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD07G0010820.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD08G0016190.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD08G0016190.2 Phenylpropanoid F5H/CYP84A medium borderline
GtomD08G0022090.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD09G0016700.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD10G0025330.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD10G0027540.1 Phenylpropanoid F5H/CYP84A medium borderline
GtomD11G0000790.1 Phenylpropanoid F5H/CYP84A medium borderline