PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
GtomA01G0007830.1 Alkaloid T3O medium borderline
GtomA01G0007840.1 Alkaloid T3O medium borderline
GtomA01G0009450.1 Alkaloid T3O medium pass
GtomA01G0010420.1 Alkaloid T3O medium borderline
GtomA01G0010440.1 Alkaloid T3O medium borderline
GtomA01G0010470.1 Alkaloid T3O medium borderline
GtomA01G0010490.1 Alkaloid T3O medium borderline
GtomA01G0010510.1 Alkaloid T3O medium borderline
GtomA01G0010520.1 Alkaloid T3O medium borderline
GtomA01G0010540.1 Alkaloid T3O medium borderline
GtomA01G0011180.1 Alkaloid T3O medium borderline
GtomA01G0013950.1 Alkaloid T3O medium borderline
GtomA01G0023120.1 Alkaloid T3O medium borderline
GtomA01G0023140.1 Alkaloid T3O medium borderline
GtomA01G0023370.1 Alkaloid T3O medium borderline
GtomA02G0000530.1 Alkaloid T3O medium borderline
GtomA02G0010150.1 Alkaloid T3O medium borderline
GtomA02G0010190.1 Alkaloid T3O medium borderline
GtomA02G0019000.1 Alkaloid T3O medium borderline
GtomA02G0019010.1 Alkaloid T3O medium borderline
GtomA02G0019020.1 Alkaloid T3O medium borderline
GtomA02G0020300.1 Alkaloid T3O medium pass
GtomA02G0020300.2 Alkaloid T3O medium pass
GtomA03G0002160.1 Alkaloid T3O medium borderline
GtomA03G0002170.1 Alkaloid T3O medium borderline
GtomA03G0002180.1 Alkaloid T3O medium borderline
GtomA03G0002190.1 Alkaloid T3O medium borderline
GtomA03G0002530.1 Alkaloid T3O medium pass
GtomA03G0002550.1 Alkaloid T3O medium pass
GtomA03G0002550.2 Alkaloid T3O medium pass
GtomA03G0006040.1 Alkaloid T3O medium pass
GtomA03G0006580.1 Alkaloid T3O low borderline
GtomA03G0007170.1 Alkaloid T3O medium pass
GtomA03G0009750.1 Alkaloid T3O medium borderline
GtomA03G0016030.1 Alkaloid T3O medium borderline
GtomA03G0018380.1 Alkaloid T3O low borderline
GtomA03G0022470.1 Alkaloid T3O medium pass
GtomA03G0022470.2 Alkaloid T3O medium pass
GtomA04G0002490.1 Alkaloid T3O medium borderline
GtomA04G0006910.1 Alkaloid T3O medium borderline
GtomA04G0006920.1 Alkaloid T3O medium borderline
GtomA04G0006940.1 Alkaloid T3O medium borderline
GtomA04G0014360.1 Alkaloid T3O medium pass
GtomA04G0017280.1 Alkaloid T3O medium borderline
GtomA04G0017290.1 Alkaloid T3O medium borderline
GtomA05G0008910.1 Alkaloid T3O low borderline
GtomA05G0009630.1 Alkaloid T3O low borderline
GtomA05G0012460.1 Alkaloid T3O medium pass
GtomA05G0016090.1 Alkaloid T3O medium pass
GtomA05G0016100.1 Alkaloid T3O medium pass