PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
GtomA03G0007380.1 Alkaloid PMT low borderline
GtomA03G0007380.2 Alkaloid PMT low borderline
GtomA03G0007380.3 Alkaloid PMT low borderline
GtomA03G0016890.1 Alkaloid PMT medium borderline
GtomA05G0005770.1 Alkaloid PMT low borderline
GtomA05G0012700.1 Alkaloid PMT low borderline
GtomA05G0012700.2 Alkaloid PMT low borderline
GtomA05G0019480.1 Alkaloid PMT low borderline
GtomA05G0037230.1 Alkaloid PMT low borderline
GtomA05G0037860.1 Alkaloid PMT medium pass
GtomA06G0010010.1 Alkaloid PMT medium pass
GtomA07G0007070.1 Alkaloid PMT medium borderline
GtomA08G0011110.1 Alkaloid PMT medium borderline
GtomA08G0011110.2 Alkaloid PMT medium borderline
GtomA08G0019400.1 Alkaloid PMT low borderline
GtomA08G0022910.1 Alkaloid PMT medium borderline
GtomA10G0008060.1 Alkaloid PMT medium pass
GtomA10G0008060.2 Alkaloid PMT medium pass
GtomA10G0029110.1 Alkaloid PMT low borderline
GtomA11G0011780.1 Alkaloid PMT medium pass
GtomA11G0025700.1 Alkaloid PMT low borderline
GtomA12G0028550.1 Alkaloid PMT medium borderline
GtomA12G0028550.2 Alkaloid PMT medium borderline
GtomA12G0028550.3 Alkaloid PMT medium borderline
GtomA12G0028550.4 Alkaloid PMT medium borderline
GtomA12G0028550.5 Alkaloid PMT medium borderline
GtomA12G0028550.6 Alkaloid PMT medium borderline
GtomA13G0012910.1 Alkaloid PMT medium pass
GtomA13G0012920.1 Alkaloid PMT medium pass
GtomA13G0019060.1 Alkaloid PMT medium pass
GtomA13G0019100.1 Alkaloid PMT low borderline
GtomD02G0005640.2 Alkaloid PMT low borderline
GtomD02G0020700.1 Alkaloid PMT medium borderline
GtomD03G0014150.1 Alkaloid PMT low borderline
GtomD04G0008330.1 Alkaloid PMT low borderline
GtomD04G0008920.1 Alkaloid PMT medium pass
GtomD05G0005910.1 Alkaloid PMT low borderline
GtomD05G0005930.1 Alkaloid PMT low borderline
GtomD05G0006070.1 Alkaloid PMT low borderline
GtomD05G0006070.2 Alkaloid PMT low borderline
GtomD05G0006110.1 Alkaloid PMT low borderline
GtomD05G0012810.1 Alkaloid PMT low borderline
GtomD05G0019800.1 Alkaloid PMT low borderline
GtomD06G0010600.1 Alkaloid PMT medium pass
GtomD07G0007130.1 Alkaloid PMT medium borderline
GtomD08G0012140.1 Alkaloid PMT medium borderline
GtomD08G0012140.2 Alkaloid PMT medium borderline
GtomD08G0020930.1 Alkaloid PMT low borderline
GtomD10G0009430.1 Alkaloid PMT medium pass
GtomD10G0017880.1 Alkaloid PMT low borderline