PlantSME Plant secondary metabolism enzyme database

Gossypium tomentosum (gossypium_tomentosum)

Imported from atlas release summary for Gossypium tomentosum.

4696
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1391 21 BAHD (633) View species results
Alkaloid pathway 1101 26 NMT (205) View species results
Phenylpropanoid pathway 1001 12 POD (408) View species results
Flavonoid pathway 512 12 UFGT (312) View species results
Rosmarinic acid pathway 384 7 C4H (133) View species results
Steroid pathway 307 13 CAS (153) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4458 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1021 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
GtomA01G0005190.1 Alkaloid 7DLH medium borderline
GtomA01G0005210.1 Alkaloid 7DLH medium borderline
GtomA01G0013830.1 Alkaloid 7DLH medium borderline
GtomA01G0024490.1 Alkaloid 7DLH medium borderline
GtomA02G0002500.1 Alkaloid 7DLH medium borderline
GtomA02G0002780.1 Alkaloid 7DLH medium borderline
GtomA02G0002790.1 Alkaloid 7DLH medium borderline
GtomA02G0002800.1 Alkaloid 7DLH medium borderline
GtomA02G0002810.1 Alkaloid 7DLH medium borderline
GtomA02G0002840.1 Alkaloid 7DLH medium borderline
GtomA02G0002870.1 Alkaloid 7DLH medium borderline
GtomA02G0002880.1 Alkaloid 7DLH medium pass
GtomA02G0002890.1 Alkaloid 7DLH medium borderline
GtomA02G0002900.1 Alkaloid 7DLH medium borderline
GtomA02G0002920.1 Alkaloid 7DLH medium borderline
GtomA02G0002930.1 Alkaloid 7DLH medium borderline
GtomA02G0002950.1 Alkaloid 7DLH medium borderline
GtomA02G0002960.1 Alkaloid 7DLH medium borderline
GtomA02G0002970.1 Alkaloid 7DLH medium pass
GtomA02G0002980.1 Alkaloid 7DLH medium borderline
GtomA03G0002540.1 Alkaloid 7DLH low borderline
GtomA03G0006780.1 Alkaloid 7DLH medium borderline
GtomA04G0008950.1 Alkaloid 7DLH medium borderline
GtomA04G0018950.1 Alkaloid 7DLH medium borderline
GtomA04G0018960.1 Alkaloid 7DLH medium borderline
GtomA05G0006890.1 Alkaloid 7DLH medium borderline
GtomA05G0021180.1 Alkaloid 7DLH medium borderline
GtomA05G0021190.1 Alkaloid 7DLH medium borderline
GtomA07G0011930.1 Alkaloid 7DLH medium borderline
GtomA07G0021020.1 Alkaloid 7DLH medium borderline
GtomA07G0021030.1 Alkaloid 7DLH medium borderline
GtomA08G0015640.1 Alkaloid 7DLH medium borderline
GtomA08G0021460.1 Alkaloid 7DLH medium borderline
GtomA08G0027600.1 Alkaloid 7DLH medium borderline
GtomA09G0004910.1 Alkaloid 7DLH medium borderline
GtomA09G0021000.1 Alkaloid 7DLH low borderline
GtomA10G0014600.1 Alkaloid 7DLH medium borderline
GtomA10G0014630.1 Alkaloid 7DLH medium borderline
GtomA11G0018500.1 Alkaloid 7DLH medium borderline
GtomA11G0038920.1 Alkaloid 7DLH medium borderline
GtomA12G0005900.1 Alkaloid 7DLH medium borderline
GtomA12G0005900.2 Alkaloid 7DLH medium borderline
GtomA12G0011480.1 Alkaloid 7DLH medium borderline
GtomA12G0026290.1 Alkaloid 7DLH medium borderline
GtomA13G0004290.1 Alkaloid 7DLH medium borderline
GtomA13G0004310.1 Alkaloid 7DLH medium borderline
GtomA13G0004330.1 Alkaloid 7DLH medium borderline
GtomA13G0006690.1 Alkaloid 7DLH medium borderline
GtomA13G0006750.1 Alkaloid 7DLH medium borderline
GtomA13G0009180.1 Alkaloid 7DLH medium borderline