PlantSME Plant secondary metabolism enzyme database
ODC

ODC

Atlas summary family ODC.

Lineage Coverage
Detected in 435 of 789 public species; click a lineage to inspect its species list.
Algae
Bryophytes
Lycophytes/Ferns
Gymnosperms
Basal angiosperms
Monocots
Eudicots
Species Distribution
Pinus taeda
Piper nigrum
Welwitschia mirabilis
Eragrostis nindensis
Related Modules
Alkaloid pathway
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Alkaloid pathway 1268 current-family members Facchini 2001; Hagel & Facchini 2013; Guirimand et al. 2014; Shoji et al. 2024; Ashihara et al. 2008
BIA benzylisoquinoline entry
TYDC_DDC 49 NCS 2188 6OMT_4OMT_SOMT 585 CNMT 1103 CYP80B1 109
BIA downstream branches
CYP719 57 COR 12777 CODM/T6ODM 213
MIA terpenoid and indole precursors
GES 29176 G8O/G8H 1896 8HGO 1497 ISY 4217 IO 1721 7DLGT 55281 7DLH 341 LAMT 943 SLS 426 TDC 33
MIA post-strictosidine branches
STR 16085 SGD 25978 GS 15620 T16H 895 16OMT 111 T3O 29276 NMT 40796
Nicotine, tropane, and purine branches
ODC 1268 ADC 2008 PMT 9370 MPO 6100 PYKS 11713 TRI/TRII 28608 H6H 6749 CYP80F1 15 XMT_MXMT_DXMT 70
Family Gene List
GeneSpeciesProtein ID
fragaria_nipponica_augustus_masked-chr4-processed-gene-87.9-mRNA-1 fragaria_nipponica fragaria_nipponica_augustus_masked-chr4-processed-gene-87.9-mRNA-1
fragaria_nipponica_augustus_masked-chr4-processed-gene-88.15-mRNA-1 fragaria_nipponica fragaria_nipponica_augustus_masked-chr4-processed-gene-88.15-mRNA-1
fragaria_nubicola_evm.model.ctg82.430 fragaria_nubicola fragaria_nubicola_evm.model.ctg82.430
fragaria_nubicola_evm.model.ctg82.431 fragaria_nubicola fragaria_nubicola_evm.model.ctg82.431
fragaria_nubicola_evm.model.ctg82.433 fragaria_nubicola fragaria_nubicola_evm.model.ctg82.433
Fves04G0032230.1 fragaria_vesca Fves04G0032230.1
Fves04G0032240.1 fragaria_vesca Fves04G0032240.1
Fves04G0032250.1 fragaria_vesca Fves04G0032250.1
Fves07G0000020.1 fragaria_vesca Fves07G0000020.1
Fves07G0000020.2 fragaria_vesca Fves07G0000020.2
Fves07G0000020.3 fragaria_vesca Fves07G0000020.3
Fves07G0000020.4 fragaria_vesca Fves07G0000020.4
fragaria_x_ananassa_augustus_masked-Fvb4-2-processed-gene-66.4-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_augustus_masked-Fvb4-2-processed-gene-66.4-mRNA-1
fragaria_x_ananassa_augustus_masked-Fvb4-3-processed-gene-50.13-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_augustus_masked-Fvb4-3-processed-gene-50.13-mRNA-1
fragaria_x_ananassa_augustus_masked-Fvb4-3-processed-gene-97.8-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_augustus_masked-Fvb4-3-processed-gene-97.8-mRNA-1
fragaria_x_ananassa_augustus_masked-Fvb4-4-processed-gene-65.3-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_augustus_masked-Fvb4-4-processed-gene-65.3-mRNA-1
fragaria_x_ananassa_maker-Fvb4-3-snap-gene-97.57-mRNA-1 fragaria_x_ananassa fragaria_x_ananassa_maker-Fvb4-3-snap-gene-97.57-mRNA-1
Fmon4035630090230 frullania_moniliata Fmon4035630090230
Fmon4048170106010 frullania_moniliata Fmon4048170106010
Fmon4053160115070 frullania_moniliata Fmon4053160115070
Gackstroemia3864440007840 gackstroemia Gackstroemia3864440007840
Gackstroemia5853020091260 gackstroemia Gackstroemia5853020091260
Gmag3864440007840 gackstroemia_magellanica Gmag3864440007840
Gmag5853020091260 gackstroemia_magellanica Gmag5853020091260
Gsulscaf_170014360.1 galdieria_sulphuraria Gsulscaf_170014360.1
Gsulscaf_340035030.1 galdieria_sulphuraria Gsulscaf_340035030.1
Gsulscaf_340035030.2 galdieria_sulphuraria Gsulscaf_340035030.2
Gsulscaf_560053930.1 galdieria_sulphuraria Gsulscaf_560053930.1
Gbil02G0021980.1 ginkgo_biloba Gbil02G0021980.1
Gbil03G0006120.1 ginkgo_biloba Gbil03G0006120.1