PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Gt00010627 gillenia_trifoliata Gt00010627
Gt00016007 gillenia_trifoliata Gt00016007
Gt00016158 gillenia_trifoliata Gt00016158
Gt00016162 gillenia_trifoliata Gt00016162
Gt00023209 gillenia_trifoliata Gt00023209
Gt00029745 gillenia_trifoliata Gt00029745
Gbil01G0007730.1 ginkgo_biloba Gbil01G0007730.1
Gbil01G0007760.1 ginkgo_biloba Gbil01G0007760.1
Gbil06G0001210.1 ginkgo_biloba Gbil06G0001210.1
Gbil06G0002500.1 ginkgo_biloba Gbil06G0002500.1
Gbil06G0011670.1 ginkgo_biloba Gbil06G0011670.1
Gbil06G0011680.1 ginkgo_biloba Gbil06G0011680.1
Gbil06G0011690.1 ginkgo_biloba Gbil06G0011690.1
Gbil06G0011720.1 ginkgo_biloba Gbil06G0011720.1
Gbil08G0006970.1 ginkgo_biloba Gbil08G0006970.1
Gbil08G0021630.1 ginkgo_biloba Gbil08G0021630.1
Gbil09G0011580.1 ginkgo_biloba Gbil09G0011580.1
Gbil09G0011590.1 ginkgo_biloba Gbil09G0011590.1
Gbil09G0016030.1 ginkgo_biloba Gbil09G0016030.1
Gbil09G0016200.1 ginkgo_biloba Gbil09G0016200.1
Gbil10G0005540.1 ginkgo_biloba Gbil10G0005540.1
Gbil10G0005710.1 ginkgo_biloba Gbil10G0005710.1
Gbil10G0005840.1 ginkgo_biloba Gbil10G0005840.1
Gbil11G0010540.1 ginkgo_biloba Gbil11G0010540.1
Gbil12G0014050.1 ginkgo_biloba Gbil12G0014050.1
Gbil12G0014080.1 ginkgo_biloba Gbil12G0014080.1
glebionis_coronaria_Gcor.h2tg000193l.g603.t1 glebionis_coronaria glebionis_coronaria_Gcor.h2tg000193l.g603.t1
glebionis_coronaria_Gcor.h2tg000193l.g604.t1 glebionis_coronaria glebionis_coronaria_Gcor.h2tg000193l.g604.t1
glebionis_coronaria_Gcor.h2tg000405l.g206.t1 glebionis_coronaria glebionis_coronaria_Gcor.h2tg000405l.g206.t1
glebionis_coronaria_Gcor.h2tg000405l.g208.t1 glebionis_coronaria glebionis_coronaria_Gcor.h2tg000405l.g208.t1