PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
Jmim09G0003120.1 jacaranda_mimosifolia Jmim09G0003120.1
Jmim09G0003130.1 jacaranda_mimosifolia Jmim09G0003130.1
Jmim09G0003150.1 jacaranda_mimosifolia Jmim09G0003150.1
Jmim09G0003170.1 jacaranda_mimosifolia Jmim09G0003170.1
Jmim09G0003180.1 jacaranda_mimosifolia Jmim09G0003180.1
Jmim10G0002740.1 jacaranda_mimosifolia Jmim10G0002740.1
Jaut4883430100830 jamesoniella_autumnalis Jaut4883430100830
Jaut4905060115200 jamesoniella_autumnalis Jaut4905060115200
Jaut4964700192080 jamesoniella_autumnalis Jaut4964700192080
Jaut4965160192760 jamesoniella_autumnalis Jaut4965160192760
Jaut4971470202990 jamesoniella_autumnalis Jaut4971470202990
Jcat01G0036210 juglans_cathayensis Jcat01G0036210
Jcat02G0022010 juglans_cathayensis Jcat02G0022010
Jcat02G0022020 juglans_cathayensis Jcat02G0022020
Jcat02G0022030 juglans_cathayensis Jcat02G0022030
Jcat04G0016580 juglans_cathayensis Jcat04G0016580
Jcat04G0016610 juglans_cathayensis Jcat04G0016610
Jcat05G0018000 juglans_cathayensis Jcat05G0018000
Jcat09G0021460 juglans_cathayensis Jcat09G0021460
juglans_cinerea_g13929.t1 juglans_cinerea juglans_cinerea_g13929.t1
juglans_cinerea_g22799.t1 juglans_cinerea juglans_cinerea_g22799.t1
juglans_cinerea_g22801.t1 juglans_cinerea juglans_cinerea_g22801.t1
juglans_cinerea_g22802.t1 juglans_cinerea juglans_cinerea_g22802.t1
juglans_cinerea_g22803.t1 juglans_cinerea juglans_cinerea_g22803.t1
juglans_cinerea_g22804.t1 juglans_cinerea juglans_cinerea_g22804.t1
juglans_cinerea_g22805.t1 juglans_cinerea juglans_cinerea_g22805.t1
juglans_cinerea_g30535.t1 juglans_cinerea juglans_cinerea_g30535.t1
juglans_cinerea_g37299.t1 juglans_cinerea juglans_cinerea_g37299.t1
juglans_cinerea_g7662.t1 juglans_cinerea juglans_cinerea_g7662.t1
Jhin01G0035640 juglans_hindsii Jhin01G0035640