PlantSME Plant secondary metabolism enzyme database
PAL

PAL

Phenylpropanoid-entry shared module: PAL/4CL/C4H are expected shared entry families across phenylpropanoid-derived libraries.

Atlas summary family PAL.

Lineage Coverage
Detected in 752 of 789 public species; click a lineage to inspect its species list.
Pathway Position Map
Pathways are arranged by literature-curated biosynthetic stages and highlight the current enzyme family; branched pathways are grouped by stage rather than forced into one linear reaction chain.
Curated order
Flavonoid pathway 7015 current-family members Mao et al. 2025; Gulzar et al. 2024; Vogt 2010
Phenylpropanoid entry
Flavonoid scaffold formation
Flavone and isoflavonoid branches
Anthocyanin and proanthocyanidin branches
Phenylpropanoid pathway 7015 current-family members Vogt 2010; Vanholme et al. 2013; Tobimatsu & Schuetz 2019; Zhao et al. 2013
Rosmarinic acid pathway 7015 current-family members Petersen & Simmonds 2003; Huang et al. 2008; Kim et al. 2004; Berger et al. 2006; Eberle et al. 2009
Phenylalanine donor branch
Tyrosine acceptor branch
Condensation and hydroxylation
Family Gene List
GeneSpeciesProtein ID
lens_culinaris_Lcu.2RBY.6g058000.1 lens_culinaris lens_culinaris_Lcu.2RBY.6g058000.1
lens_culinaris_Lcu.2RBY.6g058050.1 lens_culinaris lens_culinaris_Lcu.2RBY.6g058050.1
lens_culinaris_Lcu.2RBY.6g063550.1 lens_culinaris lens_culinaris_Lcu.2RBY.6g063550.1
lens_culinaris_Lcu.2RBY.L022450.1 lens_culinaris lens_culinaris_Lcu.2RBY.L022450.1
lens_ervoides_Ler.1DRT.1g050080.1 lens_ervoides lens_ervoides_Ler.1DRT.1g050080.1
lens_ervoides_Ler.1DRT.1g074430.1 lens_ervoides lens_ervoides_Ler.1DRT.1g074430.1
lens_ervoides_Ler.1DRT.5g000500.1 lens_ervoides lens_ervoides_Ler.1DRT.5g000500.1
lens_ervoides_Ler.1DRT.5g064550.1 lens_ervoides lens_ervoides_Ler.1DRT.5g064550.1
lens_ervoides_Ler.1DRT.6g060270.1 lens_ervoides lens_ervoides_Ler.1DRT.6g060270.1
lens_ervoides_Ler.1DRT.6g060340.1 lens_ervoides lens_ervoides_Ler.1DRT.6g060340.1
lens_ervoides_Ler.1DRT.6g060350.1 lens_ervoides lens_ervoides_Ler.1DRT.6g060350.1
lens_ervoides_Ler.1DRT.6g066920.1 lens_ervoides lens_ervoides_Ler.1DRT.6g066920.1
Lrep1235930011270 lepidozia_reptans Lrep1235930011270
Lrep1604260036610 lepidozia_reptans Lrep1604260036610
Lrep1648610062900 lepidozia_reptans Lrep1648610062900
Lrep1656180073370 lepidozia_reptans Lrep1656180073370
Lrep1659680078670 lepidozia_reptans Lrep1659680078670
Lrep1674670120970 lepidozia_reptans Lrep1674670120970
Lrep1677740142260 lepidozia_reptans Lrep1677740142260
Lrep1678080145520 lepidozia_reptans Lrep1678080145520
Lrep1678410149270 lepidozia_reptans Lrep1678410149270
Lrep1680710170400 lepidozia_reptans Lrep1680710170400
Lrep1680880174530 lepidozia_reptans Lrep1680880174530
Lrep1796210189850 lepidozia_reptans Lrep1796210189850
leptochloa_chinensis_GWHPBJVB006764 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB006764
leptochloa_chinensis_GWHPBJVB006765 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB006765
leptochloa_chinensis_GWHPBJVB006766 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB006766
leptochloa_chinensis_GWHPBJVB006767 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB006767
leptochloa_chinensis_GWHPBJVB024423 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB024423
leptochloa_chinensis_GWHPBJVB024424 leptochloa_chinensis leptochloa_chinensis_GWHPBJVB024424